RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SLITRK6Q9H5Y7 841 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 KCND1Q9NSA2 647 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 PYCARDQ9ULZ3 195 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 MSRB2Q9Y3D2 182 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 KIAA1549LQ6ZVL6 1849 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 RECQL4O94761 1208 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 SERPINC1P01008 464 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 PRKCBP05771 671 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 CLCNKBP51801 687 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 PAK1Q13153 545 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 ELF2Q15723 593 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 CD300LGQ6UXG3 332 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 KCTD17Q8N5Z5 321 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 SNX29Q8TEQ0 813 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 LARP4BQ92615 738 aaKnown RBP13.88□□□□□ -0.19
SCAF1-202ENST00000595242 RAD54LQ92698 747 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
SCAF1-202ENST00000595242 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 FAM20AQ96MK3 541 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 TMEM9BQ9NQ34 198 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 ASAH2Q9NR71 780 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 CEP72Q9P209 647 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 KLK13Q9UKR3 277 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 ACACAQ13085 2346 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 CEP192Q8TEP8 1941 aa13.88□□□□□ -0.19
SCAF1-202ENST00000595242 BCLAF3A2AJT9 711 aaKnown RBP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 CDX4O14627 284 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 ATG13O75143 517 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 RHOBTB1O94844 696 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 GLRA2P23416 452 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 ARL2P36404 184 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 BRCC3P46736 316 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 EPHA5P54756 1037 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 CCZ1BP86790 482 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 CCZ1P86791 482 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 SPAG1Q07617 926 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 UPP1Q16831 310 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 FOXR2Q6PJQ5 311 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 PDZD3Q86UT5 571 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 LEMD2Q8NC56 503 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 SAMSN1Q9NSI8 373 aaKnown RBP13.87□□□□□ -0.19
SCAF1-202ENST00000595242 RGL1Q9NZL6 768 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 PTPRDP23468 1912 aa13.87□□□□□ -0.19
SCAF1-202ENST00000595242 ASXL3Q9C0F0 2248 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 TNRC6BQ9UPQ9 1833 aaKnown RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 KHNYNO15037 678 aaKnown RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 DCLK1O15075 740 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 PRCPP42785 496 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 EHHADHQ08426 723 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 TWF1Q12792 350 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 LRMPQ12912 555 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 CTTNQ14247 550 aaKnown RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 EPHA7Q15375 998 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 UAP1L1Q3KQV9 507 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 ARHGAP29Q52LW3 1261 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 UNC13DQ70J99 1090 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 HAUS6Q7Z4H7 955 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 CAMKK1Q8N5S9 505 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 SHKBP1Q8TBC3 707 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 DHTKD1Q96HY7 919 aaPredicted RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 CDK5RAP3Q96JB5 506 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 LRRC3BQ96PB8 259 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 ZSWIM4Q9H7M6 989 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 LIMA1Q9UHB6 759 aaKnown RBP13.86□□□□□ -0.19
SCAF1-202ENST00000595242 GDAQ9Y2T3 454 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 MAST4O15021 2626 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
SCAF1-202ENST00000595242 LRRC10BA6NIK2 292 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 DGAT1O75907 488 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 PBX1P40424 430 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 TNK2Q07912 1038 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 STIM1Q13586 685 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 NR1I3Q14994 352 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 TPGS2Q68CL5 300 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 HAUS3Q68CZ6 603 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 KLHL10Q6JEL2 608 aa13.85□□□□□ -0.19
SCAF1-202ENST00000595242 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms