RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TSPY1Q01534 308 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 BFSP1Q12934 665 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 RUNX3Q13761 415 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 CCINQ13939 588 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 DDR2Q16832 855 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 L1TD1Q5T7N2 865 aaKnown RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 NT5DC4Q86YG4 428 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 TTC16Q8NEE8 873 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 CACTINQ8WUQ7 758 aaKnown RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 USP13Q92995 863 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 FAM84AQ96KN4 292 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 STRA6Q9BX79 667 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 SEMA4GQ9NTN9 838 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 TDP1Q9NUW8 608 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 SEL1LQ9UBV2 794 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 GTF3C4Q9UKN8 822 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 WDR87Q6ZQQ6 2873 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 DMXL1Q9Y485 3027 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 OTOL1A6NHN0 477 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 HUS1O60921 280 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PPP1R37O75864 691 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PAPSS2O95340 614 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 GAP43P17677 238 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 CYP2F1P24903 491 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 TXLNAP40222 546 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PNPLA4P41247 253 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 CASP5P51878 434 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 SYNPOQ8N3V7 929 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PDCL2Q8N4E4 241 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 FAM160A2Q8N612 972 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 MRPS31Q92665 395 aaKnown RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 DNAJC19Q96DA6 116 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 FAM83CQ9BQN1 747 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 HPS4Q9NQG7 708 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 DDX43Q9NXZ2 648 aaKnown RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 RBAKQ9NYW8 714 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-205ENST00000587888 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
ERCC1-205ENST00000587888 FRYLO94915 3013 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 AXIN1O15169 862 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 LDHAP00338 332 aaKnown RBP15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CSH1P0DML2 217 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CSH2P0DML3 217 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 ARSAP15289 507 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
ERCC1-205ENST00000587888 GRSF1Q12849 480 aaKnown RBP eCLIP15.22■□□□□ 0.03
ERCC1-205ENST00000587888 NFE2Q16621 373 aaPredicted RBP15.22■□□□□ 0.03
ERCC1-205ENST00000587888 FSTL4Q6MZW2 842 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CC2D1AQ6P1N0 951 aaPredicted RBP15.22■□□□□ 0.03
ERCC1-205ENST00000587888 WDR5BQ86VZ2 330 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 BRSK2Q8IWQ3 736 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CNTNAP3BQ96NU0 1288 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 ACBD6Q9BR61 282 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 CNTNAP3Q9BZ76 1288 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 PDE11AQ9HCR9 933 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 PANK4Q9NVE7 773 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 ZMYM5Q9UJ78 669 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 GPR179Q6PRD1 2367 aa15.22■□□□□ 0.03
ERCC1-205ENST00000587888 HCRTO43612 131 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 GDF9O60383 454 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 LRP3O75074 770 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
ERCC1-205ENST00000587888 PDCP20941 246 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 GARTP22102 1010 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 STAT6P42226 847 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 GALK1P51570 392 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 RPL10AP62906 217 aaKnown RBP15.21■□□□□ 0.03
ERCC1-205ENST00000587888 RBP5P82980 135 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 MYL7Q01449 175 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 CUL4AQ13619 759 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 CSRP2Q16527 193 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 SCN4BQ8IWT1 228 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 RIN3Q8TB24 985 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 FBRSL1Q9HCM7 1045 aaKnown RBP15.21■□□□□ 0.03
ERCC1-205ENST00000587888 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
ERCC1-205ENST00000587888 SLC8A2Q9UPR5 921 aa15.21■□□□□ 0.03
ERCC1-205ENST00000587888 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
ERCC1-205ENST00000587888 ATG13O75143 517 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 EGFP01133 1207 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
ERCC1-205ENST00000587888 HOXA6P31267 233 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 AMPD2Q01433 879 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 RESTQ13127 1097 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 CCDC6Q16204 474 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 CCDC142Q17RM4 750 aa15.2■□□□□ 0.02
ERCC1-205ENST00000587888 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms