RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ZNF263O14978 683 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TOMM70O94826 608 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 IL18RAPO95256 599 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 PYGMP11217 842 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 C4BPBP20851 252 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CNTFP26441 200 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 SOX6P35712 828 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TP53BP2Q13625 1128 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 NAIF1Q69YI7 327 aaPredicted RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 PKN3Q6P5Z2 889 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 LAYNQ6UX15 382 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 FAM71DQ8N9W8 422 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 PPP2R3CQ969Q6 453 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ECSITQ9BQ95 431 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ZBTB39O15060 712 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 ATP9AO75110 1047 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 ACOT2P49753 483 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 AARS2Q5JTZ9 985 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 CELF1Q92879 486 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 FAM118BQ9BPY3 351 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 CD274Q9NZQ7 290 aa13.58□□□□□ -0.24
RNF43-208ENST00000584437 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
RNF43-208ENST00000584437 GRK2P25098 689 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PTGER2P43116 358 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 CDC42EP1Q00587 391 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 CCDC81Q6ZN84 652 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 RIN3Q8TB24 985 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 RSPH1Q8WYR4 309 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 SLC39A10Q9ULF5 831 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 TFR2Q9UP52 801 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 SLC30A1Q9Y6M5 507 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PLEKP08567 350 aaPredicted RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 FCGR1AP12314 374 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 DMGDHQ9UI17 866 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PDHBP11177 359 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PTPAQ15257 358 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 TBC1D19Q8N5T2 526 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 NIF3L1Q9GZT8 377 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 CDC42EP4Q9H3Q1 356 aaKnown RBP13.57□□□□□ -0.24
RNF43-208ENST00000584437 IL1RL2Q9HB29 575 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PEX5P50542 639 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 STAT5BP51692 787 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 RASA2Q15283 850 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 SPATA33Q96N06 139 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 IMPAD1Q9NX62 359 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
RNF43-208ENST00000584437 RGS7P49802 495 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
RNF43-208ENST00000584437 C1orf131Q8NDD1 294 aaKnown RBP13.56□□□□□ -0.24
RNF43-208ENST00000584437 APPL2Q8NEU8 664 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 TRAPPC9Q96Q05 1148 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 ARIH2O95376 493 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 HERVK_113P62684 666 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 CHRNB3Q05901 458 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 TMEM132DQ14C87 1099 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 DCAF4L1Q3SXM0 396 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 IYDQ6PHW0 289 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 ELMOD1Q8N336 334 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 RIT2Q99578 217 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SIKE1Q9BRV8 207 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 MOSPD1Q9UJG1 213 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SNX13Q9Y5W8 968 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SESN1Q9Y6P5 492 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 TIMM44O43615 452 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 EXTL3O43909 919 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 AGAP9Q5VTM2 703 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 FOPNLQ96NB1 174 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 NT5C1AQ9BXI3 368 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 KRT87PA6NCN2 255 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SOAT2O75908 522 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SERPINB8P50452 374 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 SLC34A1Q06495 639 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 FBXO25Q8TCJ0 367 aa13.56□□□□□ -0.24
RNF43-208ENST00000584437 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
RNF43-208ENST00000584437 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms