RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 LIN9Q5TKA1 542 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SPECC1LQ69YQ0 1117 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 PRSS55Q6UWB4 352 aaPredicted RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 RRAGAQ7L523 313 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SPRED2Q7Z698 418 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 OSTM1Q86WC4 334 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SPATA2LQ8IUW3 424 aaPredicted RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 DRC7Q8IY82 874 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 LEMD2Q8NC56 503 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 KREMEN2Q8NCW0 462 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 PABPC5Q96DU9 382 aaKnown RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 FAM84AQ96KN4 292 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 HEXIM2Q96MH2 286 aaKnown RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 KREMEN1Q96MU8 473 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SPAG5Q96R06 1193 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 PKMYT1Q99640 499 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 XPO4Q9C0E2 1151 aaKnown RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SDCBP2Q9H190 292 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 GANQ9H2C0 597 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 PNPLA8Q9NP80 782 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 ZMYM5Q9UJ78 669 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 FBXW11Q9UKB1 542 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 COG5Q9UP83 839 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 BZW2Q9Y6E2 419 aaKnown RBP9.91□□□□□ -0.82
UBBP4-201ENST00000583708 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 GOLGA6L3A6NEY3 463 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SOBPA7XYQ1 873 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 RFXAPO00287 272 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 TRIM66O15016 1216 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 TGM5O43548 720 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 XYLBO75191 536 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ZMYND10O75800 440 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 NOL4O94818 638 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 FGF19O95750 216 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 PDGFRBP09619 1106 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 FOSL2P15408 326 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 FERP16591 822 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 LMO2P25791 158 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ANXA13P27216 316 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 CA8P35219 290 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 NRIP1P48552 1158 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 JAM2P57087 298 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 POLR2FP61218 127 aaKnown RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ZBED6P86452 979 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ITIH3Q06033 890 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 HYAL1Q12794 435 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 DRAP1Q14919 205 aaPredicted RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 PUS10Q3MIT2 529 aaKnown RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SLC39A12Q504Y0 691 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SGO2Q562F6 1265 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 TCEAL5Q5H9L2 206 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SCARA3Q6AZY7 606 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 IQCEQ6IPM2 695 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 TMEM270Q6UE05 265 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 LCLAT1Q6UWP7 414 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ITIH5Q86UX2 942 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ARHGEF19Q8IW93 802 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ELMOD1Q8N336 334 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 ANKRD52Q8NB46 1076 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SLC4A11Q8NBS3 891 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 OR10T2Q8NGX3 314 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 WHAMMQ8TF30 809 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 STK32AQ8WU08 396 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 CYFIP2Q96F07 1278 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SMARCD1Q96GM5 515 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 SPATA17Q96L03 361 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 C8orf48Q96LL4 319 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 GUCD1Q96NT3 240 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 FAM207AQ9NSI2 230 aaPredicted RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 GTF3C4Q9UKN8 822 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 CAPN11Q9UMQ6 739 aa9.9□□□□□ -0.82
UBBP4-201ENST00000583708 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
UBBP4-201ENST00000583708 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.89□□□□□ -0.83
UBBP4-201ENST00000583708 MYBPHLA2RUH7 354 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 GOLGA6L6A8MZA4 724 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 F8VZ95 297 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 RBAK-RBAKDNI3L0D1 243 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 FOXN3O00409 490 aaPredicted RBP9.89□□□□□ -0.83
UBBP4-201ENST00000583708 PRRG1O14668 218 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 LRRN2O75325 713 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 GFPT2O94808 682 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 MICAL2O94851 1124 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 SETSIPP0DME0 302 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 HAPLN1P10915 354 aaPredicted RBP9.89□□□□□ -0.83
UBBP4-201ENST00000583708 KRT5P13647 590 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 CD58P19256 250 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 CDC25BP30305 580 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 SOX5P35711 763 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 PPP3CCP48454 512 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 EPHB3P54753 998 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 ADCY1Q08828 1119 aa9.89□□□□□ -0.83
UBBP4-201ENST00000583708 VEPH1Q14D04 833 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms