RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	KARS	Q15046	597 aa	Known RBP	10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	TMEM196	Q5HYL7	178 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	RNF43	Q68DV7	783 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	PSAPL1	Q6NUJ1	521 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	TMEM150A	Q86TG1	271 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	TTC30A	Q86WT1	665 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	CD302	Q8IX05	232 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	EFCAB13	Q8IY85	973 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	ABCA7	Q8IZY2	2146 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	SPPL2B	Q8TCT7	592 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	NOC3L	Q8WTT2	800 aa	Known RBP	10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	DDX1	Q92499	740 aa	Known RBP	10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	MRPS31	Q92665	395 aa	Known RBP	10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	CALML4	Q96GE6	196 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	FAM83C	Q9BQN1	747 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	EDEM2	Q9BV94	578 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	TDP1	Q9NUW8	608 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	DSE	Q9UL01	958 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	PCDHB5	Q9Y5E4	795 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	WNT6	Q9Y6F9	365 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	CFAP47	Q6ZTR5	3102 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	ANAPC1	Q9H1A4	1944 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	IGF2R	P11717	2491 aa		10.38	□□□□□ -0.75
MSI2-208	ENST00000579466	TRDMT1	O14717	391 aa	Known RBP	10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	HCRT	O43612	131 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	ATG13	O75143	517 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	KCNK5	O95279	499 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	F11	P03951	625 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	CKM	P06732	381 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	HMGA1	P17096	107 aa	Known RBP	10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	PLCG1	P19174	1290 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	PML	P29590	882 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	HOXA6	P31267	233 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	GJA4	P35212	333 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	RAP1GAP	P47736	663 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	GALK1	P51570	392 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	SEC13	P55735	322 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	TSPY1	Q01534	308 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	GRIN1	Q05586	938 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	MTF1	Q14872	753 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	DDR2	Q16832	855 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	SV2C	Q496J9	727 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	PLK5	Q496M5	336 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	DCP1B	Q8IZD4	617 aa	Known RBP	10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	RAD54L	Q92698	747 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	LOXL4	Q96JB6	756 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	P2RY13	Q9BPV8	354 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	TPSD1	Q9BZJ3	242 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	BLOC1S4	Q9NUP1	217 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	HSFX1	Q9UBD0	423 aa		10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	AGO2	Q9UKV8	859 aa	Known RBP	10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.37	□□□□□ -0.75
MSI2-208	ENST00000579466	FRY	Q5TBA9	3013 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	KPNA7	A9QM74	516 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	SCAMP3	O14828	347 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	TADA3	O75528	432 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ITGB3	P05106	788 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ADRB2	P07550	413 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	CYP2F1	P24903	491 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	GJB2	P29033	226 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	POLR2B	P30876	1174 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	IFNAR2	P48551	515 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	NOVA1	P51513	510 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DGKE	P52429	567 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ZNF131	P52739	623 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	LIMK1	P53667	647 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	WNT7B	P56706	349 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	TFAM	Q00059	246 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	FOXC1	Q12948	553 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DMC1	Q14565	340 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ELF2	Q15723	593 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DYM	Q7RTS9	669 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	SFR1	Q86XK3	245 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	SCN4B	Q8IWT1	228 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	CPA6	Q8N4T0	437 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ZSWIM2	Q8NEG5	633 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	C2orf15	Q8WU43	125 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	POMGNT1	Q8WZA1	660 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	EZH1	Q92800	747 aa	Predicted RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	SAAL1	Q96ER3	474 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ZNF560	Q96MR9	790 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	SLC22A12	Q96S37	553 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	TSPAN18	Q96SJ8	248 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	CYP2S1	Q96SQ9	504 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	KIF2C	Q99661	725 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ASB7	Q9H672	318 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	ECT2	Q9H8V3	914 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	KIF9	Q9HAQ2	790 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	VPS45	Q9NRW7	570 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DUS2	Q9NX74	493 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DDX43	Q9NXZ2	648 aa	Known RBP	10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	TBC1D7	Q9P0N9	293 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	DERA	Q9Y315	318 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	C2CD2	Q9Y426	696 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	KIF3A	Q9Y496	699 aa		10.36	□□□□□ -0.75
MSI2-208	ENST00000579466	FAM208B	Q5VWN6	2430 aa		10.35	□□□□□ -0.75
MSI2-208	ENST00000579466	GOLGA8IP	A6NC78	632 aa		10.35	□□□□□ -0.75
MSI2-208	ENST00000579466	ANTXRL	A6NF34	631 aa		10.35	□□□□□ -0.75
MSI2-208	ENST00000579466	GOLGA8J	A6NMD2	632 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms