RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 NEK3P51956 506 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 LILRA4P59901 499 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 DCAF12L1Q5VU92 463 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 SORCS2Q96PQ0 1159 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 PCGF6Q9BYE7 350 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 ZNF518BQ9C0D4 1074 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 CHST12Q9NRB3 414 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 INTS13Q9NVM9 706 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 TESQ9UGI8 421 aaKnown RBP6.13□□□□□ -1.43
CDC27-219ENST00000576484 SNX13Q9Y5W8 968 aa6.13□□□□□ -1.43
CDC27-219ENST00000576484 A0A0B4J269 797 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 PIPSLA2A3N6 862 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 KPNA5O15131 536 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 SOAT2O75908 522 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 NBPF7P0C2Y1 421 aaPredicted RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 ATXN1LP0C7T5 689 aaKnown RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 HMGA2P52926 109 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 WNT3P56703 355 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 LOXL3P58215 753 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 TUBB3Q13509 450 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 IQCB1Q15051 598 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 PTPAQ15257 358 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 SLC44A4Q53GD3 710 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 RBM20Q5T481 1227 aaKnown RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 SPATA31A3Q5VYP0 1347 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 TMEM108Q6UXF1 575 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 SLC30A5Q8TAD4 765 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 PTCD3Q96EY7 689 aaKnown RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 MSLNLQ96KJ4 702 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 MS4A7Q9GZW8 240 aaPredicted RBP6.12□□□□□ -1.43
CDC27-219ENST00000576484 PCED1AQ9H1Q7 454 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 TBCCD1Q9NVR7 557 aa6.12□□□□□ -1.43
CDC27-219ENST00000576484 MBD3L4A6NDZ8 208 aaPredicted RBP6.11□□□□□ -1.43
CDC27-219ENST00000576484 MBD3L3A6NE82 208 aaPredicted RBP6.11□□□□□ -1.43
CDC27-219ENST00000576484 F5H697 171 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 PYCARD-AS1I3L0S3 204 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 PPP3CBP16298 524 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 RPL17P18621 184 aaKnown RBP6.11□□□□□ -1.43
CDC27-219ENST00000576484 PRIM2P49643 509 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 CASP5P51878 434 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 SF3B3Q15393 1217 aaKnown RBP6.11□□□□□ -1.43
CDC27-219ENST00000576484 VPS53Q5VIR6 699 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 ABHD17BQ5VST6 288 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 Q6ZPA2 131 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 ZNF280BQ86YH2 543 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 VRK3Q8IV63 474 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 LNX2Q8N448 690 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 PARD3BQ8TEW8 1205 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 RAPGEF4Q8WZA2 1011 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 LPIN2Q92539 896 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 Q96MF0 132 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 MOGAT1Q96PD6 335 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 TBCBQ99426 244 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 MESP1Q9BRJ9 268 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 A1CFQ9NQ94 594 aaKnown RBP6.11□□□□□ -1.43
CDC27-219ENST00000576484 TBC1D30Q9Y2I9 924 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 PAXBP1Q9Y5B6 917 aa6.11□□□□□ -1.43
CDC27-219ENST00000576484 GRID2IPA4D2P6 1211 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 IL1R1P14778 569 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 KLRC1P26715 233 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 CD6P30203 668 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 PXNP49023 591 aaPredicted RBP6.1□□□□□ -1.43
CDC27-219ENST00000576484 HNRNPMP52272 730 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDC27-219ENST00000576484 ZNF543Q08ER8 600 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 PICALMQ13492 652 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 ZIK1Q3SY52 487 aaPredicted RBP6.1□□□□□ -1.43
CDC27-219ENST00000576484 LAYNQ6UX15 382 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 ZDHHC24Q6UX98 284 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 Q6YL49 198 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 GAS2L3Q86XJ1 694 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 FAM109AQ8N4B1 249 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 OSBPL9Q96SU4 736 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 CASS4Q9NQ75 786 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 KCTD5Q9NXV2 234 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 PHTF1Q9UMS5 762 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 SHOC2Q9UQ13 582 aa6.1□□□□□ -1.43
CDC27-219ENST00000576484 FOXN3O00409 490 aaPredicted RBP6.09□□□□□ -1.43
CDC27-219ENST00000576484 TRIAP1O43715 76 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 PLIN1O60240 522 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 SRGNP10124 158 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 CYP2C9P11712 490 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 KRT4P19013 534 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 TM4SF4P48230 202 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
CDC27-219ENST00000576484 DAG1Q14118 895 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 LONRF1Q17RB8 773 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 PLA1AQ53H76 456 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 SYCP2LQ5T4T6 812 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 LIX1LQ8IVB5 337 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 LCORLQ8N3X6 602 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC27-219ENST00000576484 MYCBPAPQ8TBZ2 947 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 SPSB4Q96A44 273 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 STK31Q9BXU1 1019 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 UNKQ9C0B0 810 aaKnown RBP6.09□□□□□ -1.43
CDC27-219ENST00000576484 PNPLA8Q9NP80 782 aa6.09□□□□□ -1.43
CDC27-219ENST00000576484 SLC52A1Q9NWF4 448 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms