RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
CDC27-219ENST00000576484 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
CDC27-219ENST00000576484 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
CDC27-219ENST00000576484 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
CDC27-219ENST00000576484 FOXD1Q16676 465 aa20.79■□□□□ 0.92
CDC27-219ENST00000576484 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
CDC27-219ENST00000576484 ADRA2BP18089 450 aa19.95■□□□□ 0.78
CDC27-219ENST00000576484 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
CDC27-219ENST00000576484 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
CDC27-219ENST00000576484 MSH5O43196 834 aa19.18■□□□□ 0.66
CDC27-219ENST00000576484 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
CDC27-219ENST00000576484 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
CDC27-219ENST00000576484 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
CDC27-219ENST00000576484 KCNA4P22459 653 aa17.87■□□□□ 0.45
CDC27-219ENST00000576484 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
CDC27-219ENST00000576484 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
CDC27-219ENST00000576484 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
CDC27-219ENST00000576484 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
CDC27-219ENST00000576484 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
CDC27-219ENST00000576484 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
CDC27-219ENST00000576484 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
CDC27-219ENST00000576484 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
CDC27-219ENST00000576484 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
CDC27-219ENST00000576484 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
CDC27-219ENST00000576484 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CDC27-219ENST00000576484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.267e-8■□□□□ 8.3
CDC27-219ENST00000576484 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
CDC27-219ENST00000576484 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
CDC27-219ENST00000576484 ZBTB22O15209 634 aa16.48■□□□□ 0.23
CDC27-219ENST00000576484 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
CDC27-219ENST00000576484 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
CDC27-219ENST00000576484 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
CDC27-219ENST00000576484 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
CDC27-219ENST00000576484 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
CDC27-219ENST00000576484 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
CDC27-219ENST00000576484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
CDC27-219ENST00000576484 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
CDC27-219ENST00000576484 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
CDC27-219ENST00000576484 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
CDC27-219ENST00000576484 CAPN15O75808 1086 aa15.95■□□□□ 0.14
CDC27-219ENST00000576484 APLP2Q06481 763 aa15.92■□□□□ 0.14
CDC27-219ENST00000576484 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
CDC27-219ENST00000576484 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
CDC27-219ENST00000576484 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
CDC27-219ENST00000576484 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
CDC27-219ENST00000576484 ABCB7O75027 752 aa15.65■□□□□ 0.1
CDC27-219ENST00000576484 DSG3P32926 999 aa15.61■□□□□ 0.09
CDC27-219ENST00000576484 POLA2Q14181 598 aa15.52■□□□□ 0.08
CDC27-219ENST00000576484 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
CDC27-219ENST00000576484 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CDC27-219ENST00000576484 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
CDC27-219ENST00000576484 OSCARQ8IYS5 282 aa15□□□□□ -0.01
CDC27-219ENST00000576484 FKBP8Q14318 412 aa14.9□□□□□ -0.02
CDC27-219ENST00000576484 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
CDC27-219ENST00000576484 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
CDC27-219ENST00000576484 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
CDC27-219ENST00000576484 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
CDC27-219ENST00000576484 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
CDC27-219ENST00000576484 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
CDC27-219ENST00000576484 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
CDC27-219ENST00000576484 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
CDC27-219ENST00000576484 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDC27-219ENST00000576484 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
CDC27-219ENST00000576484 PROM2Q8N271 834 aa14.49□□□□□ -0.09
CDC27-219ENST00000576484 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
CDC27-219ENST00000576484 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
CDC27-219ENST00000576484 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
CDC27-219ENST00000576484 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
CDC27-219ENST00000576484 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
CDC27-219ENST00000576484 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
CDC27-219ENST00000576484 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
CDC27-219ENST00000576484 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
CDC27-219ENST00000576484 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
CDC27-219ENST00000576484 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDC27-219ENST00000576484 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
CDC27-219ENST00000576484 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
CDC27-219ENST00000576484 POTEHQ6S545 545 aa14.03□□□□□ -0.16
CDC27-219ENST00000576484 MIER1Q8N108 512 aa14.01□□□□□ -0.17
CDC27-219ENST00000576484 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
CDC27-219ENST00000576484 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
CDC27-219ENST00000576484 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
CDC27-219ENST00000576484 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
CDC27-219ENST00000576484 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
CDC27-219ENST00000576484 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
CDC27-219ENST00000576484 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
CDC27-219ENST00000576484 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
CDC27-219ENST00000576484 HAX1O00165 279 aa13.78□□□□□ -0.2
CDC27-219ENST00000576484 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDC27-219ENST00000576484 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
CDC27-219ENST00000576484 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
CDC27-219ENST00000576484 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
CDC27-219ENST00000576484 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
CDC27-219ENST00000576484 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CDC27-219ENST00000576484 EVX2Q03828 476 aa13.61□□□□□ -0.23
CDC27-219ENST00000576484 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
CDC27-219ENST00000576484 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CDC27-219ENST00000576484 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
CDC27-219ENST00000576484 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
CDC27-219ENST00000576484 NUBP1P53384 320 aa13.57□□□□□ -0.24
CDC27-219ENST00000576484 PKD2Q13563 968 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms