RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 GSCP56915 257 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 PURAQ00577 322 aaKnown RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 PTPN11Q06124 597 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 DENND1BQ6P3S1 775 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 TTC27Q6P3X3 843 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 TMC3Q7Z5M5 1100 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 NIPA2Q8N8Q9 360 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 ARMC5Q96C12 935 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 TMEM176AQ96HP8 235 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 MCEEQ96PE7 176 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 TRIM31Q9BZY9 425 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 SDCBP2Q9H190 292 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 NEUROG2Q9H2A3 272 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 MTRF1LQ9UGC7 380 aaKnown RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 FEZ2Q9UHY8 353 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 KIAA1257Q9ULG3 409 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 VDRP11473 427 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 CCL5P13501 91 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 DARSP14868 501 aaKnown RBP19.78■□□□□ 0.76
SPNS3-204ENST00000575194 HSD17B3P37058 310 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 INCA1Q0VD86 236 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 PPP1R15BQ5SWA1 713 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 SLC4A11Q8NBS3 891 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 ZNF333Q96JL9 665 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 USTQ9Y2C2 406 aa19.78■□□□□ 0.76
SPNS3-204ENST00000575194 TCRBV7S2A1N4TA0A589 114 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 HAS3O00219 553 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 MYL3P08590 195 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 GNAT1P11488 350 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 RCOR2Q8IZ40 523 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 ZDHHC14Q8IZN3 488 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 WDTC1Q8N5D0 677 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 PIK3R5Q8WYR1 880 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 ZBTB9Q96C00 473 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 SNX27Q96L92 541 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 TSPAN18Q96SJ8 248 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 MIS12Q9H081 205 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 ZDHHC18Q9NUE0 388 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 DDX56Q9NY93 547 aaKnown RBP19.77■□□□□ 0.76
SPNS3-204ENST00000575194 BARX2Q9UMQ3 279 aaPredicted RBP19.77■□□□□ 0.76
SPNS3-204ENST00000575194 PLAAQ9Y263 795 aa19.77■□□□□ 0.76
SPNS3-204ENST00000575194 GAS8O95995 478 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 LMAN1P49257 510 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 CDH8P55286 799 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 TAS2R40P59535 323 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 COPS2P61201 443 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 PPP1R7Q15435 360 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 STILQ15468 1287 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 KCNA10Q16322 511 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 RNF180Q86T96 592 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 BEST2Q8NFU1 509 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 ELOVL4Q9GZR5 314 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 RNF208Q9H0X6 261 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 SYNCQ9H7C4 482 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 SCN10AQ9Y5Y9 1956 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 PPFIA2O75334 1257 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 FGFR4P22455 802 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 HOXA11P31270 313 aaPredicted RBP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 RPL7AP62424 266 aaKnown RBP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 DHX9Q08211 1270 aaKnown RBP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 ODF2Q5BJF6 829 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 UBLCP1Q8WVY7 318 aaPredicted RBP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 OSMRQ99650 979 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 OSBPL8Q9BZF1 889 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 TRIM6Q9C030 488 aaPredicted RBP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.76■□□□□ 0.75
SPNS3-204ENST00000575194 GINS2Q9Y248 185 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 SNX24Q9Y343 169 aa19.76■□□□□ 0.75
SPNS3-204ENST00000575194 SIGLEC16A6NMB1 481 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 MYCP01106 439 aaPredicted RBP19.75■□□□□ 0.75
SPNS3-204ENST00000575194 ASGR1P07306 291 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 ATF7P17544 494 aaPredicted RBP19.75■□□□□ 0.75
SPNS3-204ENST00000575194 TMEM62Q0P6H9 643 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 ZNF268Q14587 947 aaPredicted RBP19.75■□□□□ 0.75
SPNS3-204ENST00000575194 CNGA2Q16280 664 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 PTPN20Q4JDL3 420 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 CXCL17Q6UXB2 119 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 RUFY4Q6ZNE9 571 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 LRRC52Q8N7C0 313 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 PCSK9Q8NBP7 692 aaKnown RBP19.75■□□□□ 0.75
SPNS3-204ENST00000575194 FNIP1Q8TF40 1166 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 DCLK3Q9C098 648 aa19.75■□□□□ 0.75
SPNS3-204ENST00000575194 PDCD11Q14690 1871 aaKnown RBP19.75■□□□□ 0.75
SPNS3-204ENST00000575194 C17orf102A2RUQ5 167 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 M0QYV0 167 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 XPOTO43592 962 aaKnown RBP19.74■□□□□ 0.75
SPNS3-204ENST00000575194 MICAL2O94851 1124 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 GJB6O95452 261 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 KRT1P04264 644 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 RALAP11233 206 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 PTPN7P35236 360 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 GJC1P36383 396 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 RPL21P46778 160 aaKnown RBP19.74■□□□□ 0.75
SPNS3-204ENST00000575194 PSMC1P62191 440 aaKnown RBP19.74■□□□□ 0.75
SPNS3-204ENST00000575194 ADAM17P78536 824 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 CALCOCO2Q13137 446 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 KLF1Q13351 362 aaPredicted RBP19.74■□□□□ 0.75
SPNS3-204ENST00000575194 CYP4A22Q5TCH4 519 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 POLNQ7Z5Q5 900 aa19.74■□□□□ 0.75
SPNS3-204ENST00000575194 NME8Q8N427 588 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms