RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 C1orf228Q6PIY5 440 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 MIB1Q86YT6 1006 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 SYT12Q8IV01 421 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 ZBTB8OSQ8IWT0 167 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 CD101Q93033 1021 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 SEPT5Q99719 369 aaPredicted RBP7.85□□□□□ -1.15
SMG6-205ENST00000570659 TRIM9Q9C026 710 aa7.85□□□□□ -1.15
SMG6-205ENST00000570659 C2orf78A6NCI8 922 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 TNFRSF10BO14763 440 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 TRIM24O15164 1050 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 FAM189A1O60320 539 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 DKC1O60832 514 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMG6-205ENST00000570659 ATG13O75143 517 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 ATXN1LP0C7T5 689 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 DRD1P21728 446 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 MAOBP27338 520 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 NAMPTP43490 491 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 NPTX2P47972 431 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 PLCB2Q00722 1185 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 YWHAHQ04917 246 aaPredicted RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 SSRP1Q08945 709 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 USP4Q13107 963 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 MTF1Q14872 753 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 KARSQ15046 597 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 TRIP6Q15654 476 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 SLC39A12Q504Y0 691 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 USP39Q53GS9 565 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 KCNK18Q7Z418 384 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 HAUS6Q7Z4H7 955 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 EFCAB13Q8IY85 973 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 FBXL16Q8N461 479 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 IL17RCQ8NAC3 791 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 TXNDC5Q8NBS9 432 aaKnown RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 DEPTORQ8TB45 409 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 PIP4K2CQ8TBX8 421 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 SLC39A7Q92504 469 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 P2RY11Q96G91 374 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 ADPGKQ9BRR6 497 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 SEMA4CQ9C0C4 833 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 IKZF4Q9H2S9 585 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 SLC32A1Q9H598 525 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 CD248Q9HCU0 757 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 SCUBE2Q9NQ36 999 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 CIZ1Q9ULV3 898 aaPredicted RBP7.84□□□□□ -1.15
SMG6-205ENST00000570659 MMP17Q9ULZ9 603 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 BTBD3Q9Y2F9 522 aa7.84□□□□□ -1.15
SMG6-205ENST00000570659 TMEM131Q92545 1883 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 COL12A1Q99715 3063 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 TRABD2BA6NFA1 517 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 TRIM66O15016 1216 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 TLX3O43711 291 aaPredicted RBP7.83□□□□□ -1.16
SMG6-205ENST00000570659 DEXIO95424 95 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 KLF8O95600 359 aaPredicted RBP7.83□□□□□ -1.16
SMG6-205ENST00000570659 GCFC2P16383 781 aaKnown RBP7.83□□□□□ -1.16
SMG6-205ENST00000570659 LRPAP1P30533 357 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 RPL9P32969 192 aaKnown RBP7.83□□□□□ -1.16
SMG6-205ENST00000570659 TIE1P35590 1138 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 ALDH1A3P47895 512 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 WNT7BP56706 349 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 SCRN1Q12765 414 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 NBR1Q14596 966 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 SAFBQ15424 915 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMG6-205ENST00000570659 CALCRLQ16602 461 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 LYSMD4Q5XG99 296 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 OVOS1Q6IE37 1185 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 BAHD1Q8TBE0 780 aaPredicted RBP7.83□□□□□ -1.16
SMG6-205ENST00000570659 HMGB4Q8WW32 186 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 WBP2Q969T9 261 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 ZCWPW1Q9H0M4 648 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 C2orf40Q9H1Z8 148 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 TDP1Q9NUW8 608 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 GCNT4Q9P109 453 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 ARHGAP28Q9P2N2 729 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 PCDHA12Q9UN75 941 aa7.83□□□□□ -1.16
SMG6-205ENST00000570659 A0A087WV48 116 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 TTC26A0AVF1 554 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 LACTBL1A8MY62 500 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 SLC16A4O15374 487 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 DKK1O94907 266 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 CYP17A1P05093 508 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 NFICP08651 508 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 HAPLN1P10915 354 aaPredicted RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 GABRG2P18507 467 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 WASP42768 502 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 KIR2DL1P43626 348 aaPredicted RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 PEX3P56589 373 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 LMAN2Q12907 356 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 PTPN13Q12923 2485 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 MYO1EQ12965 1108 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 DMP1Q13316 513 aaPredicted RBP7.82□□□□□ -1.16
SMG6-205ENST00000570659 ZNF423Q2M1K9 1284 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 MGAT5BQ3V5L5 792 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 ARHGAP15Q53QZ3 475 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
SMG6-205ENST00000570659 TOGARAM2Q6ZUX3 1019 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms