RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NDST1P52848 882 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 PMS2P54278 862 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 MYO1EQ12965 1108 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 XYLT1Q86Y38 959 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 ATL2Q8NHH9 583 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 FNIP1Q8TF40 1166 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 HEXIM2Q96MH2 286 aaKnown RBP19.15■□□□□ 0.66
SMPD3-211ENST00000568373 SLITRK1Q96PX8 696 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 CXCL16Q9H2A7 254 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 PABPC3Q9H361 631 aaKnown RBP19.15■□□□□ 0.66
SMPD3-211ENST00000568373 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 WHRNQ9P202 907 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 SCN1AP35498 2009 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 M0QYV0 167 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 KRT1P04264 644 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 RGS2P41220 211 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 YARSP54577 528 aaKnown RBP19.15■□□□□ 0.66
SMPD3-211ENST00000568373 SKOR1P84550 965 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 CALCOCO2Q13137 446 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 PTK6Q13882 451 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 ZFYVE27Q5T4F4 411 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 DNAJB3Q8WWF6 145 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 ZMAT2Q96NC0 199 aaKnown RBP19.15■□□□□ 0.66
SMPD3-211ENST00000568373 EPB41L4BQ9H329 900 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 Q9Y3F1 56 aa19.15■□□□□ 0.66
SMPD3-211ENST00000568373 TRIP12Q14669 1992 aaPredicted RBP19.14■□□□□ 0.66
SMPD3-211ENST00000568373 PI4K2BG5E9Z4 385 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 ERBB2P04626 1255 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 PSMA2P25787 234 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 GPD2P43304 727 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 EIF3BP55884 814 aaKnown RBP19.14■□□□□ 0.65
SMPD3-211ENST00000568373 COPS2P61201 443 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 PDCLQ13371 301 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 ZNF268Q14587 947 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-211ENST00000568373 ZBTB6Q15916 424 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 DNAJC21Q5F1R6 531 aaKnown RBP19.14■□□□□ 0.65
SMPD3-211ENST00000568373 ZNF784Q8NCA9 323 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-211ENST00000568373 CCDC114Q96M63 670 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 APBA2Q99767 749 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 AP5M1Q9H0R1 490 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 ASIC3Q9UHC3 531 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 PRDM4Q9UKN5 801 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 KIAA1257Q9ULG3 409 aa19.14■□□□□ 0.65
SMPD3-211ENST00000568373 RPS6KA5O75582 802 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 MYL3P08590 195 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 GABRB2P47870 512 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 EMC10Q5UCC4 262 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 TXNRD3NBQ6F5E7 133 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 MFSD7Q6UXD7 560 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 POLNQ7Z5Q5 900 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 IFNL1Q8IU54 200 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 JOSD2Q8TAC2 188 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 SOCS4Q8WXH5 440 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 NT5C1AQ9BXI3 368 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 CAPS2Q9BXY5 557 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 DDX56Q9NY93 547 aaKnown RBP19.13■□□□□ 0.65
SMPD3-211ENST00000568373 HES2Q9Y543 173 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 TREHO43280 583 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 TJP3O95049 919 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 NUDT17P0C025 328 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 AXLP30530 894 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 PTPN7P35236 360 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 BEX3Q00994 111 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 SLMAPQ14BN4 828 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 SNX17Q15036 470 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 ODF2Q5BJF6 829 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 KDM7AQ6ZMT4 941 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 SPOCD1Q6ZMY3 1216 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 TRIM6Q9C030 488 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-211ENST00000568373 CENPHQ9H3R5 247 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 NXF3Q9H4D5 531 aaKnown RBP19.13■□□□□ 0.65
SMPD3-211ENST00000568373 CNTN3Q9P232 1028 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 GJD2Q9UKL4 321 aa19.13■□□□□ 0.65
SMPD3-211ENST00000568373 TP73O15350 636 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 IGHA2P01877 340 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 KRT10P13645 584 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ATF7P17544 494 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ITIH2P19823 946 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 NR1D1P20393 614 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 IVDP26440 423 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ZSCAN26Q16670 478 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 RGMBQ6NW40 437 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 LCLAT1Q6UWP7 414 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ALKAL1Q6UXT8 129 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 SAPCD2Q86UD0 394 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 BEST2Q8NFU1 509 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 TMEM40Q8WWA1 233 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 MCRS1Q96EZ8 462 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 SNF8Q96H20 258 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 METTL5Q9NRN9 209 aaKnown RBP19.12■□□□□ 0.65
SMPD3-211ENST00000568373 TUBGCP4Q9UGJ1 667 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 NEU2Q9Y3R4 380 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 RECQL4O94761 1208 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ZNF200P98182 395 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-211ENST00000568373 ADCY2Q08462 1091 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 IFFO1Q0D2I5 559 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 KAZNQ674X7 775 aa19.12■□□□□ 0.65
SMPD3-211ENST00000568373 DENND2CQ68D51 928 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms