RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
CCNDBP1-204ENST00000563065 TWNKQ96RR1 684 aa18.64■□□□□ 0.57
CCNDBP1-204ENST00000563065 HSD3B7Q9H2F3 369 aa18.64■□□□□ 0.57
CCNDBP1-204ENST00000563065 POMKQ9H5K3 350 aa18.64■□□□□ 0.57
CCNDBP1-204ENST00000563065 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
CCNDBP1-204ENST00000563065 C2orf16Q68DN1 1984 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 PTPN1P18031 435 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 SP100P23497 879 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 CYP2F1P24903 491 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 GPR15P49685 360 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 APBA1Q02410 837 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 MAN2A1Q16706 1144 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 PUS10Q3MIT2 529 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 MGAT5BQ3V5L5 792 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 MDH1BQ5I0G3 518 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 GRASPQ7Z6J2 395 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 ACOT1Q86TX2 421 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 DHX40Q8IX18 779 aaKnown RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 WHAMMQ8TF30 809 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 NECAB3Q96P71 396 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 SEPT5Q99719 369 aaPredicted RBP18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 PIDD1Q9HB75 910 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 CEP72Q9P209 647 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 YIPF1Q9Y548 306 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 PCDHB5Q9Y5E4 795 aa18.63■□□□□ 0.57
CCNDBP1-204ENST00000563065 P4HA2O15460 535 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 PAPLNO95428 1278 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 VWA3BQ502W6 1294 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 TJAP1Q5JTD0 557 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 ARHGEF19Q8IW93 802 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 GPR152Q8TDT2 470 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 KAT5Q92993 513 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 MYLPFQ96A32 169 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 INTS2Q9H0H0 1204 aaKnown RBP18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 CYP3A43Q9HB55 503 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 DNMT3BQ9UBC3 853 aaKnown RBP18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 MAFFQ9ULX9 164 aa18.62■□□□□ 0.57
CCNDBP1-204ENST00000563065 LRG1P02750 347 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 HNRNPA1P09651 372 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 HAPLN1P10915 354 aaPredicted RBP18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 SLC9A1P19634 815 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 HOXA9P31269 272 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 ZNF165P49910 485 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 CYP27A1Q02318 531 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 CETN1Q12798 172 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 KRT31Q15323 416 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 ZNF394Q53GI3 561 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 SDHAF4Q5VUM1 108 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 RRAGAQ7L523 313 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 B3GALNT2Q8NCR0 500 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 MYCBPAPQ8TBZ2 947 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 RIPOR3Q96MK2 946 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 ELOVL4Q9GZR5 314 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 NAT10Q9H0A0 1025 aaKnown RBP18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
CCNDBP1-204ENST00000563065 CLDN5O00501 218 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 CILPO75339 1184 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 ATF6P18850 670 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 BDNFP23560 247 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 EEF1GP26641 437 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 MTHFRP42898 656 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 CUL2Q13617 745 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 NFE2Q16621 373 aaPredicted RBP18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 PHLDB3Q6NSJ2 640 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 SPATA2LQ8IUW3 424 aaPredicted RBP18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 HS6ST3Q8IZP7 471 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 C12orf29Q8N999 325 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 SPPL2BQ8TCT7 592 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 GIPC2Q8TF65 315 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 C2orf15Q8WU43 125 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 NT5C1BQ96P26 610 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 BPIFA3Q9BQP9 254 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 B3GNT5Q9BYG0 378 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 VPS16Q9H269 839 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 CISHQ9NSE2 258 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 GCNT4Q9P109 453 aa18.6■□□□□ 0.57
CCNDBP1-204ENST00000563065 NRG2O14511 850 aaPredicted RBP18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 XYLBO75191 536 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 ZNF18P17022 549 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 ALDH1A3P47895 512 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 CACNA2D1P54289 1103 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 SMARCB1Q12824 385 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 IQCB1Q15051 598 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 DDR2Q16832 855 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 RTL10Q7L3V2 364 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 PPM1KQ8N3J5 372 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 CORO1BQ9BR76 489 aa18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 WDR6Q9NNW5 1121 aaKnown RBP18.59■□□□□ 0.57
CCNDBP1-204ENST00000563065 GBP6Q6ZN66 633 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms