RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 GPR149Q86SP6 731 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 TCEAL8Q8IYN2 117 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 SUSD6Q92537 303 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 MYLPFQ96A32 169 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 ASB2Q96Q27 587 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 TWNKQ96RR1 684 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 CRACR2AQ9BSW2 395 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 RHOBTB2Q9BYZ6 727 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 INTS2Q9H0H0 1204 aaKnown RBP16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 ZDHHC7Q9NXF8 308 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 GCNT4Q9P109 453 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 YIPF1Q9Y548 306 aa16.56■□□□□ 0.24
LYSMD2-204ENST00000560491 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 NDST1P52848 882 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 ITIH3Q06033 890 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 INCA1Q0VD86 236 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 TWF1Q12792 350 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 CUL2Q13617 745 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 KRT31Q15323 416 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 MDH1BQ5I0G3 518 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 FAM171BQ6P995 826 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 ARHGEF19Q8IW93 802 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 EHBP1Q8NDI1 1231 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 SMG7Q92540 1137 aaKnown RBP16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 NT5C1BQ96P26 610 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 SEPT5Q99719 369 aaPredicted RBP16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 PRKD2Q9BZL6 878 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 CYP3A43Q9HB55 503 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
LYSMD2-204ENST00000560491 LRG1P02750 347 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 HNRNPA1P09651 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 ZNF18P17022 549 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 HOXA9P31269 272 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 CYP27A1Q02318 531 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 APBA1Q02410 837 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 SMAD2Q15796 467 aaKnown RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 NFE2Q16621 373 aaPredicted RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 PUS10Q3MIT2 529 aaKnown RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 MGAT5BQ3V5L5 792 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 MYCBPAPQ8TBZ2 947 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 C2orf15Q8WU43 125 aaKnown RBP16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 KAT5Q92993 513 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 PCED1BQ96HM7 432 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 VPS16Q9H269 839 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 POMKQ9H5K3 350 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 HCFC1R1Q9NWW0 138 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 MAFFQ9ULX9 164 aa16.54■□□□□ 0.24
LYSMD2-204ENST00000560491 NOTCH4Q99466 2003 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 CILPO75339 1184 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 PAPLNO95428 1278 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 ATP1A3P13637 1013 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 SLC9A1P19634 815 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 CYP2F1P24903 491 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 GPR15P49685 360 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 SMARCB1Q12824 385 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 IQCB1Q15051 598 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 ZNF394Q53GI3 561 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 ATAT1Q5SQI0 421 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 WHAMMQ8TF30 809 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 RIPOR3Q96MK2 946 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
LYSMD2-204ENST00000560491 SMTNL1A8MU46 457 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 BECN2A8MW95 431 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 CLDN5O00501 218 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 XYLBO75191 536 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 BMP1P13497 986 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 CCDC130P13994 396 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 ATF6P18850 670 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 SP100P23497 879 aaPredicted RBP16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 TBXAS1P24557 533 aaPredicted RBP16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 PON1P27169 355 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 MTHFRP42898 656 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 COPB1P53618 953 aaKnown RBP16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 NTHL1P78549 312 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 SDHAF4Q5VUM1 108 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 GJB7Q6PEY0 223 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
LYSMD2-204ENST00000560491 GRASPQ7Z6J2 395 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms