RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GABRB3P28472 473 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ATICP31939 592 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ELF1P32519 619 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 AARSP49588 968 aaKnown RBP eCLIP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PRKAG1P54619 331 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ALDH18A1P54886 795 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 RAC3P60763 192 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 DLG4P78352 724 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PIGFQ07326 219 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 FOXO1Q12778 655 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 GPS1Q13098 491 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 DUSP8Q13202 625 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 MRPL49Q13405 166 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SLC12A1Q13621 1099 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 RIN1Q13671 783 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 KCNAB1Q14722 419 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 UBXN2BQ14CS0 331 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 IQCB1Q15051 598 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 RPS6KA2Q15349 733 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 MAPKAPK3Q16644 382 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TBR1Q16650 682 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF827Q17R98 1081 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 FBXO47Q5MNV8 452 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PRR31Q5SQ13 230 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 HYIQ5T013 277 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ATPAF1Q5TC12 328 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ANKS6Q68DC2 871 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PLAG1Q6DJT9 500 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 LIN54Q6MZP7 749 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 USP17L6PQ6QN14 398 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ZDHHC24Q6UX98 284 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SLC30A10Q6XR72 485 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 MED25Q71SY5 747 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 RRAGAQ7L523 313 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 GGNQ86UU5 652 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 FAM83AQ86UY5 434 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 LRRTM4Q86VH4 590 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 KBTBD2Q8IY47 623 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 COLGALT2Q8IYK4 626 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TMEFF1Q8IYR6 380 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 VGLL2Q8N8G2 317 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TXNDC5Q8NBS9 432 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PDPRQ8NCN5 879 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 FBXO15Q8NCQ5 510 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SHCBP1Q8NEM2 672 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 ASB12Q8WXK4 309 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 RABGGTAQ92696 567 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 HDAC2Q92769 488 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 LCORQ96JN0 433 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SLC46A1Q96NT5 459 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TRAPPC9Q96Q05 1148 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SMOQ99835 787 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 CPEB1Q9BZB8 566 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 REXO4Q9GZR2 422 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 KCNH6Q9H252 994 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 UNC45AQ9H3U1 944 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 MLXIPQ9HAP2 919 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 GPR35Q9HC97 309 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TMOD4Q9NZQ9 345 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 PDP2Q9P2J9 529 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 HERC5Q9UII4 1024 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 CNOT6Q9ULM6 557 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SCAF8Q9UPN6 1271 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 SHOC2Q9UQ13 582 aa2.65□□□□□ -1.99
GABPB1-209ENST00000559100 MTO1Q9Y2Z2 717 aaKnown RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 TTBK1Q5TCY1 1321 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-209ENST00000559100 A0A1B0GTL3 188 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 A0A1B0GVC2 190 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 AQP7P3A6NL99 342 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 A6NLC8 198 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 TBKBP1A7MCY6 615 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 EYA2O00167 538 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 B4GALT4O60513 344 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 CDC14BO60729 498 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 SNX2O60749 519 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 SRGAP2O75044 1071 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 RNASEH2AO75792 299 aaKnown RBP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 SOAT2O75908 522 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 KRT38O76015 456 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 STC2O76061 302 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 ITGA5P08648 1049 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 IFIT1P09914 478 aaKnown RBP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 FAM163BP0C2L3 166 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 CKMT1AP12532 417 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 PECAM1P16284 738 aaPredicted RBP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 NPPBP16860 134 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 EGR1P18146 543 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 BTF3P20290 206 aaKnown RBP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 VIPR2P41587 438 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 BCAT1P54687 386 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 AP2B1P63010 937 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 HGFACQ04756 655 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 ZNF844Q08AG5 666 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 NSUN2Q08J23 767 aaKnown RBP eCLIP2.64□□□□□ -1.99
GABPB1-209ENST00000559100 TRPC3Q13507 836 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 CUL4BQ13620 913 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 TOMM20Q15388 145 aa2.64□□□□□ -1.99
GABPB1-209ENST00000559100 BMT2Q1RMZ1 405 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms