RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PCDHB5Q9Y5E4 795 aa27.26■■□□□ 1.95
SMAD6-202ENST00000557916 HNRNPA1P09651 372 aaKnown RBP eCLIP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 PTPN1P18031 435 aaKnown RBP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 NDST1P52848 882 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 MRPS5P82675 430 aaKnown RBP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 INCA1Q0VD86 236 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 SMAD4Q13485 552 aaKnown RBP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 EXOC3L4Q17RC7 722 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 CCDC142Q17RM4 750 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 CES5AQ6NT32 575 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 SPPL2BQ8TCT7 592 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 CRISPLD1Q9H336 500 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 ABI2Q9NYB9 513 aaPredicted RBP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 LIMA1Q9UHB6 759 aaKnown RBP27.25■■□□□ 1.95
SMAD6-202ENST00000557916 INSL5Q9Y5Q6 135 aa27.25■■□□□ 1.95
SMAD6-202ENST00000557916 MBTPS2O43462 519 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 TBXAS1P24557 533 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 MAPRE1Q15691 268 aaKnown RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 PUS10Q3MIT2 529 aaKnown RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 LRSAM1Q6UWE0 723 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 PPM1KQ8N3J5 372 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 TTC39CQ8N584 583 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 MYCBPAPQ8TBZ2 947 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 TNIP3Q96KP6 325 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 PRKD2Q9BZL6 878 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 CISHQ9NSE2 258 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 HSFX1Q9UBD0 423 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 HMGXB4Q9UGU5 601 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 USP15Q9Y4E8 981 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 GRXCR2A6NFK2 248 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 LRG1P02750 347 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 SLC9A1P19634 815 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 HOXA9P31269 272 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 MDH1BQ5I0G3 518 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 PTCRAQ6ISU1 281 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 TRIM65Q6PJ69 517 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 GPR149Q86SP6 731 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 SPATA2LQ8IUW3 424 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 B3GALNT2Q8NCR0 500 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 FEZF2Q8TBJ5 459 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 ZNF707Q96C28 371 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
SMAD6-202ENST00000557916 FAM124BQ9H5Z6 455 aaPredicted RBP27.24■■□□□ 1.95
SMAD6-202ENST00000557916 CCL16O15467 120 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 CILPO75339 1184 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 PAPLNO95428 1278 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 ATP1A3P13637 1013 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 KCNQ1P51787 676 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 COPB1P53618 953 aaKnown RBP27.23■■□□□ 1.95
SMAD6-202ENST00000557916 ORC1Q13415 861 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 ATAT1Q5SQI0 421 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 C4orf50Q6ZRC1 276 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 RRAGAQ7L523 313 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 ACOT1Q86TX2 421 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 LUZP1Q86V48 1076 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 ARHGEF19Q8IW93 802 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 TTC9BQ8N6N2 239 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 SMG7Q92540 1137 aaKnown RBP27.23■■□□□ 1.95
SMAD6-202ENST00000557916 MYLPFQ96A32 169 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 TWNKQ96RR1 684 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 NT5C1AQ9BXI3 368 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 TSPY26PQ9H489 355 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 PIDD1Q9HB75 910 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 CDH22Q9UJ99 828 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 YIPF1Q9Y548 306 aa27.23■■□□□ 1.95
SMAD6-202ENST00000557916 LRRC10BA6NIK2 292 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 XYLBO75191 536 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 PON1P27169 355 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 TUFMP49411 452 aaKnown RBP27.22■■□□□ 1.95
SMAD6-202ENST00000557916 YWHAEP62258 255 aaKnown RBP27.22■■□□□ 1.95
SMAD6-202ENST00000557916 CYP27A1Q02318 531 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 PHLDB3Q6NSJ2 640 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 CYP26C1Q6V0L0 522 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.22■■□□□ 1.95
SMAD6-202ENST00000557916 CRYBG2Q8N1P7 616 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 FAM200AQ8TCP9 573 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 WHAMMQ8TF30 809 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 RIPOR3Q96MK2 946 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 ASB2Q96Q27 587 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 SEPT5Q99719 369 aaPredicted RBP27.22■■□□□ 1.95
SMAD6-202ENST00000557916 ABCB6Q9NP58 842 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 FAM50BQ9Y247 325 aa27.22■■□□□ 1.95
SMAD6-202ENST00000557916 TRIM21P19474 475 aaKnown RBP27.21■■□□□ 1.95
SMAD6-202ENST00000557916 ALDH1A3P47895 512 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 GCNT1Q02742 428 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 TWF1Q12792 350 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 MGAT5BQ3V5L5 792 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 SUSD6Q92537 303 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 KAT5Q92993 513 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 PCED1BQ96HM7 432 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 FUBP3Q96I24 572 aaKnown RBP eCLIP27.21■■□□□ 1.95
SMAD6-202ENST00000557916 RHOBTB2Q9BYZ6 727 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 DNAI2Q9GZS0 605 aa27.21■■□□□ 1.95
SMAD6-202ENST00000557916 SOAT2O75908 522 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 HAPLN1P10915 354 aaPredicted RBP27.2■■□□□ 1.94
SMAD6-202ENST00000557916 CYP2F1P24903 491 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 MTHFRP42898 656 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 TPM4P67936 248 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 PLD1Q13393 1074 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 CFAP221Q4G0U5 840 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms