RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 F11P03951 625 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 CYP3A4P08684 503 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 SRGAP2CP0DJJ0 459 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 ZSCAN22P10073 491 aaPredicted RBP7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 SFNP31947 248 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 HSPA4P34932 840 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 CCR2P41597 374 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 MAPK8P45983 427 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 JAK3P52333 1124 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 NCBP1Q09161 790 aaKnown RBP7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 SEMA3BQ13214 749 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 TUSC3Q13454 348 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 HNRNPDQ14103 355 aaKnown RBP7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 PCBP1Q15365 356 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 XKR3Q5GH77 459 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 WWC2Q6AWC2 1192 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 IQCEQ6IPM2 695 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 PKN3Q6P5Z2 889 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 ELMOD1Q8N336 334 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 VWA5B2Q8N398 1253 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 LEMD2Q8NC56 503 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 GSTCDQ8NEC7 633 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 NCOA7Q8NI08 942 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 HHIPQ96QV1 700 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 CEP89Q96ST8 783 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 EIF2AQ9BY44 585 aaKnown RBP7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 GPR88Q9GZN0 384 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 CSRNP2Q9H175 543 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 SLITRK6Q9H5Y7 841 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 MINDY3Q9H8M7 445 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 OGFRQ9NZT2 677 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 STIM2Q9P246 746 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 MTRRQ9UBK8 725 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 NCANO14594 1321 aa7.47□□□□□ -1.21
SPTLC2-206ENST00000557566 TCHHQ07283 1943 aa7.46□□□□□ -1.21
SPTLC2-206ENST00000557566 ADAMTS9Q9P2N4 1935 aa7.46□□□□□ -1.21
SPTLC2-206ENST00000557566 ATMQ13315 3056 aa7.46□□□□□ -1.21
SPTLC2-206ENST00000557566 COL12A1Q99715 3063 aa7.46□□□□□ -1.21
SPTLC2-206ENST00000557566 PTPRBP23467 1997 aa7.46□□□□□ -1.21
SPTLC2-206ENST00000557566 GON4LQ3T8J9 2241 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TMEM150BA6NC51 233 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CASTOR2A6NHX0 329 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CHMP2AO43633 222 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 APBB3O95704 486 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CALM1P0DP23 149 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CALM2P0DP24 149 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CALM3P0DP25 149 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 MSX1P28360 303 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PTPAQ15257 358 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 ARHGAP29Q52LW3 1261 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 USP39Q53GS9 565 aaKnown RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PRR16Q569H4 304 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TRIM61Q5EBN2 209 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CCNI2Q6ZMN8 369 aaPredicted RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 NFXL1Q6ZNB6 911 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 SV2AQ7L0J3 742 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 HDDC3Q8N4P3 179 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 RNF214Q8ND24 703 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 LSM14AQ8ND56 463 aaKnown RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 ZNF461Q8TAF7 563 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TTC8Q8TAM2 541 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 IGDCC4Q8TDY8 1250 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PSPC1Q8WXF1 523 aaKnown RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 SLC7A3Q8WY07 619 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PIGKQ92643 395 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 ZSCAN31Q96LW9 406 aaPredicted RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TMEM209Q96SK2 561 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 SH2D3AQ9BRG2 576 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PAAF1Q9BRP4 392 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TM6SF1Q9BZW5 370 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PHACTR1Q9C0D0 580 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 NXF3Q9H4D5 531 aaKnown RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 GTSE1Q9NYZ3 720 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CGNQ9P2M7 1197 aaKnown RBP7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 CACNG4Q9UBN1 327 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 EBF1Q9UH73 591 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 PAXBP1Q9Y5B6 917 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TEX15Q9BXT5 2789 aa7.46□□□□□ -1.22
SPTLC2-206ENST00000557566 TNRC6BQ9UPQ9 1833 aaKnown RBP7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 SMCO2A6NFE2 343 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 CAPN8A6NHC0 703 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 CCDC69A6NI79 296 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 SMTNL1A8MU46 457 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 hCG_1984214I3L0E3 225 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 CAPN9O14815 690 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 NEMFO60524 1076 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 TSPAN1O60635 241 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 GAS7O60861 476 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 F13A1P00488 732 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 MYL4P12829 197 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 ENGP17813 658 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 RXRAP19793 462 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 FGFR3P22607 806 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 AKAP5P24588 427 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 CDC25BP30305 580 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 TXLNAP40222 546 aa7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 DHPSP49366 369 aaPredicted RBP7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 ATXN3P54252 364 aaPredicted RBP7.45□□□□□ -1.22
SPTLC2-206ENST00000557566 TEAD2Q15562 447 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms