RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 YIPF1Q9Y548 306 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 INSL5Q9Y5Q6 135 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 DOCK6Q96HP0 2047 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 PATJQ8NI35 1801 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 BECN2A8MW95 431 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 PES1O00541 588 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 MBTPS2O43462 519 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 CILPO75339 1184 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 PAPLNO95428 1278 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 SLC9A1P19634 815 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 HOXA9P31269 272 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 KCNQ1P51787 676 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 APBA1Q02410 837 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 SMARCB1Q12824 385 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 DUSP4Q13115 394 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 NFE2Q16621 373 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 EXOC3L4Q17RC7 722 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 MDH1BQ5I0G3 518 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 FAM171BQ6P995 826 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 TRIM65Q6PJ69 517 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 APTXQ7Z2E3 356 aaKnown RBP15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 UNC93AQ86WB7 457 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 PPM1KQ8N3J5 372 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 UBR7Q8N806 425 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 B3GALNT2Q8NCR0 500 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 ANKRD20A12PQ8NF67 263 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 FAM200AQ8TCP9 573 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 WHAMMQ8TF30 809 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 KAT5Q92993 513 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 TSPY26PQ9H489 355 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 CISHQ9NSE2 258 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 MAFFQ9ULX9 164 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 SLC27A5Q9Y2P5 690 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 USP15Q9Y4E8 981 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 PCDHB5Q9Y5E4 795 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 MYH10P35580 1976 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 NOTCH4Q99466 2003 aa15.84■□□□□ 0.13
VIPAS39-210ENST00000557466 CCDC195A0A1B0GUA6 201 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 CCL16O15467 120 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 SOAT2O75908 522 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 CAVIN2O95810 425 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 HNRNPA1P09651 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 PTPN1P18031 435 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 TBXAS1P24557 533 aaPredicted RBP15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 PON1P27169 355 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF445P59923 1031 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 ITIH3Q06033 890 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 KCNMA1Q12791 1236 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 UVSSAQ2YD98 709 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 PHLDB3Q6NSJ2 640 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 GPR149Q86SP6 731 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 ACOT1Q86TX2 421 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 MYCBPAPQ8TBZ2 947 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 SPPL2BQ8TCT7 592 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 C2orf15Q8WU43 125 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 PCED1BQ96HM7 432 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 TNIP3Q96KP6 325 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 RHOBTB2Q9BYZ6 727 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 ELOVL4Q9GZR5 314 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 SIX2Q9NPC8 291 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 GREB1Q4ZG55 1949 aa15.83■□□□□ 0.12
VIPAS39-210ENST00000557466 TCF20Q9UGU0 1960 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 LGALS16A8MUM7 142 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 LRG1P02750 347 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 TPM2P07951 284 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 HAPLN1P10915 354 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 GCNT1Q02742 428 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 TWF1Q12792 350 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 MAPRE1Q15691 268 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 MGAT5BQ3V5L5 792 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 PTCRAQ6ISU1 281 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 GJB7Q6PEY0 223 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 RTL10Q7L3V2 364 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 SPATA2LQ8IUW3 424 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 ATXN2LQ8WWM7 1075 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 SUSD6Q92537 303 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 SMG7Q92540 1137 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 KREMEN1Q96MU8 473 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 SEPT5Q99719 369 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 NT5C1AQ9BXI3 368 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 PRKD2Q9BZL6 878 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 HSFX1Q9UBD0 423 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 OBSL1O75147 1896 aa15.82■□□□□ 0.12
VIPAS39-210ENST00000557466 PRUNE2Q8WUY3 3088 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 POU2F2P09086 479 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 CCDC130P13994 396 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 IL9P15248 144 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 ATF6P18850 670 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 ACO1P21399 889 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 GPR15P49685 360 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 RAD23BP54727 409 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 YWHAEP62258 255 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 CYP27A1Q02318 531 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 AAK1Q2M2I8 961 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms