RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 PI4K2AQ9BTU6 479 aa21.93■■□□□ 1.1
FOXN3-209ENST00000555353 WDR6Q9NNW5 1121 aaKnown RBP21.93■■□□□ 1.1
FOXN3-209ENST00000555353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.93■■□□□ 1.15e-8■■■■■ 197.4
FOXN3-209ENST00000555353 POU2F2P09086 479 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 ATP1A3P13637 1013 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 NOP14P78316 857 aaKnown RBP21.92■■□□□ 1.1
FOXN3-209ENST00000555353 NFE2Q16621 373 aaPredicted RBP21.92■■□□□ 1.1
FOXN3-209ENST00000555353 FILIP1LQ4L180 1135 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 SPOPLQ6IQ16 392 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 LRRTM3Q86VH5 581 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 ELMOD1Q8N336 334 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 SYT15Q9BQS2 421 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 SMYD3Q9H7B4 428 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 HSFX1Q9UBD0 423 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 LIMA1Q9UHB6 759 aaKnown RBP21.92■■□□□ 1.1
FOXN3-209ENST00000555353 CDH9Q9ULB4 789 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 SLC27A5Q9Y2P5 690 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 NR2E1Q9Y466 385 aa21.92■■□□□ 1.1
FOXN3-209ENST00000555353 HCRTO43612 131 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 VNN2O95498 520 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 PDGFRBP09619 1106 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 PRKCSHP14314 528 aaPredicted RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 SP100P23497 879 aaPredicted RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 LMO2P25791 158 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 ALDH1A3P47895 512 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CDR1P51861 262 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 TWF1Q12792 350 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 PLD1Q13393 1074 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CBWD6Q4V339 395 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CBWD3Q5JTY5 395 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CBWD5Q5RIA9 395 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 GRASPQ7Z6J2 395 aaPredicted RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 GJD3Q8N144 294 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 SPPL2BQ8TCT7 592 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 TUBGCP2Q9BSJ2 902 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 RAB20Q9NX57 234 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 ABI2Q9NYB9 513 aaPredicted RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 YIPF1Q9Y548 306 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 PCDHB5Q9Y5E4 795 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CLUHO75153 1309 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 TPM3P06753 285 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 TUFMP49411 452 aaKnown RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CDH8P55286 799 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 FANCCQ00597 558 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 KRT31Q15323 416 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 MAN2A1Q16706 1144 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 MGAT5BQ3V5L5 792 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 SEPT5Q99719 369 aaPredicted RBP21.91■■□□□ 1.1
FOXN3-209ENST00000555353 CRISPLD1Q9H336 500 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 GTF3C4Q9UKN8 822 aa21.91■■□□□ 1.1
FOXN3-209ENST00000555353 LRRC10BA6NIK2 292 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 A8MXQ7 604 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 CBFA2T2O43439 604 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 N4BP1O75113 896 aaKnown RBP21.9■■□□□ 1.1
FOXN3-209ENST00000555353 RAP1GAPP47736 663 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 FMO5P49326 533 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 PSMC1P62191 440 aaKnown RBP21.9■■□□□ 1.1
FOXN3-209ENST00000555353 MAPRE1Q15691 268 aaKnown RBP21.9■■□□□ 1.1
FOXN3-209ENST00000555353 IQCEQ6IPM2 695 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 TRIM59Q8IWR1 403 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 TTC9BQ8N6N2 239 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 SEMA4DQ92854 862 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 ZNF512Q96ME7 567 aaPredicted RBP21.9■■□□□ 1.1
FOXN3-209ENST00000555353 TMLHEQ9NVH6 421 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 USTQ9Y2C2 406 aa21.9■■□□□ 1.1
FOXN3-209ENST00000555353 C19orf67A6NJJ6 358 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 ASPAP45381 313 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 EPHB3P54753 998 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 CETN1Q12798 172 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 SARM1Q6SZW1 724 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 OTOP3Q7RTS5 596 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 SPATA2LQ8IUW3 424 aaPredicted RBP21.89■■□□□ 1.09
FOXN3-209ENST00000555353 TDRD5Q8NAT2 981 aaKnown RBP21.89■■□□□ 1.09
FOXN3-209ENST00000555353 ACSF2Q96CM8 615 aaPredicted RBP21.89■■□□□ 1.09
FOXN3-209ENST00000555353 NIF3L1Q9GZT8 377 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 APOBEC3GQ9HC16 384 aaKnown RBP21.89■■□□□ 1.09
FOXN3-209ENST00000555353 HCFC1R1Q9NWW0 138 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 TAB2Q9NYJ8 693 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 COQ4Q9Y3A0 265 aa21.89■■□□□ 1.09
FOXN3-209ENST00000555353 MYBPHLA2RUH7 354 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 LOC730098B7Z3J9 87 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 PES1O00541 588 aaKnown RBP21.88■■□□□ 1.09
FOXN3-209ENST00000555353 ATP2C2O75185 946 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 PTPN2P17706 415 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 FSHRP23945 695 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 COPB1P53618 953 aaKnown RBP21.88■■□□□ 1.09
FOXN3-209ENST00000555353 UBASH3AP57075 661 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 PABPC1LQ4VXU2 614 aaKnown RBP21.88■■□□□ 1.09
FOXN3-209ENST00000555353 FAM171BQ6P995 826 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 C4orf50Q6ZRC1 276 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 ANP32BQ92688 251 aaKnown RBP21.88■■□□□ 1.09
FOXN3-209ENST00000555353 PKMYT1Q99640 499 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 ABCB6Q9NP58 842 aa21.88■■□□□ 1.09
FOXN3-209ENST00000555353 DNMT3BQ9UBC3 853 aaKnown RBP21.88■■□□□ 1.09
FOXN3-209ENST00000555353 LRRN2O75325 713 aa21.87■■□□□ 1.09
FOXN3-209ENST00000555353 SOAT2O75908 522 aa21.87■■□□□ 1.09
FOXN3-209ENST00000555353 NTHL1P78549 312 aa21.87■■□□□ 1.09
FOXN3-209ENST00000555353 GET4Q7L5D6 327 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms