RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LZTS1Q9Y250 596 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 ASB1Q9Y576 335 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 DMRT1Q9Y5R6 373 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 FLT4P35916 1363 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 COL15A1P39059 1388 aa4.89□□□□□ -1.63
ATXN3-227ENST00000554491 UBR2Q8IWV8 1755 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 A0A1B0GUA9 196 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 BOLA2-SMG1P6H3BVE0 249 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CEP104O60308 925 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CELF2O95319 508 aaKnown RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 SERPINB2P05120 415 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CCNCP24863 283 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 APEX1P27695 318 aaKnown RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 PIK3CAP42336 1068 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 PSMD7P51665 324 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ADCY7P51828 1080 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CSE1LP55060 971 aaKnown RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ZBED6P86452 979 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 COX10Q12887 443 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 G3BP1Q13283 466 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 PTPROQ16827 1216 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 AGAP9Q5VTM2 703 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ABHD17CQ6PCB6 329 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CLEC17AQ6ZS10 378 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 HDGFL2Q7Z4V5 671 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 TMEM110Q86TL2 294 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 RSPH3Q86UC2 560 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 RTN4RL1Q86UN2 441 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 SKAP1Q86WV1 359 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 GPC2Q8N158 579 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 CLASRPQ8N2M8 674 aaKnown RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 KIAA1958Q8N8K9 716 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ATP11CQ8NB49 1132 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 C3orf20Q8ND61 904 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 GSTCDQ8NEC7 633 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ZNF397Q8NF99 534 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 FAM81AQ8TBF8 368 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 RABGGTAQ92696 567 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 FOXRED1Q96CU9 486 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 DTNBP1Q96EV8 351 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 GPHA2Q96T91 129 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 NAP1L3Q99457 506 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ALDH8A1Q9H2A2 487 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 ZHX3Q9H4I2 956 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 NRDE2Q9H7Z3 1164 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 SPTLC3Q9NUV7 552 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 TUBA8Q9NY65 449 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 RGL1Q9NZL6 768 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
ATXN3-227ENST00000554491 COL6A3P12111 3177 aa4.88□□□□□ -1.63
ATXN3-227ENST00000554491 A0A087WUV0 522 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 TBKBP1A7MCY6 615 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 KIF2AO00139 706 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 ERC2O15083 957 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 KDM1AO60341 852 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 ZBED4O75132 1171 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RPS6KA5O75582 802 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 LDHCP07864 332 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 PHKG2P15735 406 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 IL4RP24394 825 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SDHAP31040 664 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 NEK2P51955 445 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RRP1P56182 461 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MPP3Q13368 585 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 BIRC3Q13489 604 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RRS1Q15050 365 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 ARHGEF6Q15052 776 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MAPRE1Q15691 268 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 PKN2Q16513 984 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MUM1Q2TAK8 710 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC144BQ3MJ40 725 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 ALDH1L2Q3SY69 923 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC93Q567U6 631 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RRP12Q5JTH9 1297 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC158Q5M9N0 1113 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CCDC122Q5T0U0 273 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 AKNAD1Q5T1N1 836 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MFN1Q8IWA4 741 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 DNAJC10Q8IXB1 793 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 PRPF38AQ8NAV1 312 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SMYD1Q8NB12 490 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CTCFLQ8NI51 663 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 CALML6Q8TD86 181 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 TEKT4Q8WW24 435 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RUNDC1Q96C34 613 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 ZG16BQ96DA0 208 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SAAL1Q96ER3 474 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 NAF1Q96HR8 494 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 COG3Q96JB2 828 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RPL10LQ96L21 214 aaKnown RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MAGEB10Q96LZ2 347 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 TTC14Q96N46 770 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MMADHCQ9H3L0 296 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RABEP2Q9H5N1 569 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 GPRC5BQ9NZH0 403 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 SFMBT1Q9UHJ3 866 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 MCM8Q9UJA3 840 aa4.87□□□□□ -1.63
ATXN3-227ENST00000554491 RCAN3Q9UKA8 241 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms