RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ST13P5Q8NFI4 369 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 ZNF558Q96NG5 402 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 STK33Q9BYT3 514 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 MTMR12Q9C0I1 747 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 DZANK1Q9NVP4 752 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 DNAJC12Q9UKB3 198 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 FHOD1Q9Y613 1164 aa15.49■□□□□ 0.07
SHMT2-208ENST00000553868 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.49■□□□□ 0.07
SHMT2-208ENST00000553868 PTPRJQ12913 1337 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 C9IYK1 514 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 RECQL4O94761 1208 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 CXCL14O95715 111 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 ITGA4P13612 1032 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 ASIC2Q16515 512 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 MEA1Q16626 185 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 JADE1Q6IE81 842 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 IQCEQ6IPM2 695 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 DPY19L2P1Q6NXN4 242 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 GPR149Q86SP6 731 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 SLC44A3Q8N4M1 653 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 OR5B17Q8NGF7 314 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 TAF4BQ92750 862 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 PGBD4Q96DM1 585 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 NXF3Q9H4D5 531 aaKnown RBP15.48■□□□□ 0.07
SHMT2-208ENST00000553868 UBE2TQ9NPD8 197 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-208ENST00000553868 RGS18Q9NS28 235 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 SPG21Q9NZD8 308 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 IGSF9Q9P2J2 1179 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 PARP2Q9UGN5 583 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 ANGPTL2Q9UKU9 493 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 ITGA11Q9UKX5 1188 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 IPPQ9Y573 584 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
SHMT2-208ENST00000553868 BZW2Q9Y6E2 419 aaKnown RBP15.48■□□□□ 0.07
SHMT2-208ENST00000553868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 NT5C1B-RDH14C9J2C7 533 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 RNF225M0QZC1 329 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SPTLC1O15269 473 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 CCP110O43303 1012 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 ZNF623O75123 536 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 CLSTN1O94985 981 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 NFICP08651 508 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 FERP16591 822 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 TBXAS1P24557 533 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 GCNT1Q02742 428 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 CSTF1Q05048 431 aaKnown RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 DSC3Q14574 896 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SGSM1Q2NKQ1 1148 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 PHLDB3Q6NSJ2 640 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SLC24A5Q71RS6 500 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 EFCAB13Q8IY85 973 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 PPM1KQ8N3J5 372 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 BEST2Q8NFU1 509 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 PJA1Q8NG27 643 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SLC22A17Q8WUG5 538 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SEMA4DQ92854 862 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SECISBP2LQ93073 1101 aaKnown RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 JAKMIP2Q96AA8 810 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 FAXDC2Q96IV6 333 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 CASD1Q96PB1 797 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 APOL6Q9BWW8 343 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 ARHGEF3Q9NR81 526 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 RNF19AQ9NV58 838 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 SPATA6Q9NWH7 488 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-208ENST00000553868 AIPL1Q9NZN9 384 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 CNTN3Q9P232 1028 aa15.47■□□□□ 0.07
SHMT2-208ENST00000553868 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 SLC30A4O14863 429 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 IPO7O95373 1038 aaKnown RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 VNN1O95497 513 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 SERPING1P05155 500 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 KCNE1P15382 129 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 ATICP31939 592 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 CYLC1P35663 651 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 JAM2P57087 298 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 SPEM2Q0P670 501 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 DRAP1Q14919 205 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 TMEM139Q8IV31 216 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 SLC39A11Q8N1S5 342 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 SMG8Q8ND04 991 aaKnown RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 ATRIPQ8WXE1 791 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 UBQLN1Q9UMX0 589 aaKnown RBP15.46■□□□□ 0.07
SHMT2-208ENST00000553868 GIT1Q9Y2X7 761 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 HES2Q9Y543 173 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 MIA3Q5JRA6 1907 aa15.46■□□□□ 0.07
SHMT2-208ENST00000553868 WDFY3Q8IZQ1 3526 aa15.46■□□□□ 0.06
SHMT2-208ENST00000553868 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 A0A0U1RQF3 1178 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ESPNB1AK53 854 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 F8VZ95 297 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 ASS1P00966 412 aaKnown RBP15.45■□□□□ 0.06
SHMT2-208ENST00000553868 KRT19P08727 400 aa15.45■□□□□ 0.06
SHMT2-208ENST00000553868 SRFP11831 508 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms