RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
CNOT2-223ENST00000550160 PCDHGC3Q9UN70 934 aa12.34□□□□□ -0.43
CNOT2-223ENST00000550160 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
CNOT2-223ENST00000550160 A0A087X0T9 212 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 O00370 1275 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 DDX3XO00571 662 aaKnown RBP eCLIP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 LCA5LO95447 670 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 SOD2P04179 222 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 URODP06132 367 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 FAM228BP0C875 321 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 MSNP26038 577 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 CTNNB1P35222 781 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 NSFP46459 744 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 GLUD2P49448 558 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 CREMQ03060 361 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 MTF1Q14872 753 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 RAB30Q15771 203 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 ASTE1Q2TB18 679 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 ARHGAP17Q68EM7 881 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 C4orf50Q6ZRC1 276 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 TFAP2BQ92481 460 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 CYFIP2Q96F07 1278 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 SAMD11Q96NU1 681 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 HERC2P3Q9BVR0 1158 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 DPEP3Q9H4B8 488 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 FAM49BQ9NUQ9 324 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
CNOT2-223ENST00000550160 SSX2IPQ9Y2D8 614 aa12.33□□□□□ -0.44
CNOT2-223ENST00000550160 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 M0QYV0 167 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 RTN2O75298 545 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 FGF18O76093 207 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 GZMAP12544 262 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 CHRNB2P17787 502 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 BMPR1AP36894 532 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 MAGEA1P43355 309 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 BCAT1P54687 386 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 SNX16P57768 344 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 PLCB3Q01970 1234 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 SMARCB1Q12824 385 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 NFE2Q16621 373 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 TOGARAM2Q6ZUX3 1019 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 TMEM173Q86WV6 379 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 GPR65Q8IYL9 337 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 BCL7CQ8WUZ0 217 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 HNRNPABQ99729 332 aaKnown RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 DESI2Q9BSY9 194 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 C11orf84Q9BUA3 381 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-223ENST00000550160 MIS12Q9H081 205 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 LHX5Q9H2C1 402 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 PYCARDQ9ULZ3 195 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 ADGRG1Q9Y653 693 aa12.32□□□□□ -0.44
CNOT2-223ENST00000550160 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-223ENST00000550160 HCRTO43612 131 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 MICAL2O94851 1124 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 CALCAP01258 141 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 CYP1A1P04798 512 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-223ENST00000550160 RB1P06400 928 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 CPB1P15086 417 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 ADORA2BP29275 332 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 BMP8BP34820 402 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 RGS19P49795 217 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 VAV2P52735 878 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 RABGGTBP53611 331 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 NOMO3P69849 1222 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 UBE3AQ05086 875 aa12.31□□□□□ -0.44
CNOT2-223ENST00000550160 BST2Q10589 180 aaKnown RBP12.31□□□□□ -0.44
CNOT2-223ENST00000550160 MRPL58Q14197 206 aaKnown RBP12.31□□□□□ -0.44
CNOT2-223ENST00000550160 PSMD5Q16401 504 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms