RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 MAP4K3Q8IVH8 894 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 TMEM130Q8N3G9 435 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 LEMD2Q8NC56 503 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 ZBTB44Q8NCP5 570 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 NELL1Q92832 810 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 SMARCD2Q92925 531 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 IRF7Q92985 503 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 HAPLN2Q9GZV7 340 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 ZSCAN32Q9NX65 697 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 ZDHHC3Q9NYG2 299 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 KCND2Q9NZV8 630 aa13.05□□□□□ -0.32
TUBA1B-205ENST00000549870 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 NDUFB5O43674 189 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 LILRB5O75023 590 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 CLTAP09496 248 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 MYL4P12829 197 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 CPB1P15086 417 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 GJA1P17302 382 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 PSMC3P17980 439 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 GDI1P31150 447 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 VIPR2P41587 438 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 EPHA5P54756 1037 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 YWHAHQ04917 246 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 MTAPQ13126 283 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 ARSHQ5FYA8 562 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 WDR44Q5JSH3 913 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 VITQ6UXI7 678 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 BEST2Q8NFU1 509 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 OXCT2Q9BYC2 517 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 TRPV5Q9NQA5 729 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 ASAH2Q9NR71 780 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 UBQLN1Q9UMX0 589 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 NDRG2Q9UN36 371 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 TIMM13Q9Y5L4 95 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-205ENST00000549870 DCHS1Q96JQ0 3298 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 SPTBN4Q9H254 2564 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 LACTBL1A8MY62 500 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 H0YCG3 227 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 VNN2O95498 520 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 OR4Q2P0C623 313 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 BMP2P12643 396 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 ZNF16P17020 682 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 CYP3A5P20815 502 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 TNFSF9P41273 254 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 AARSP49588 968 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 TEAD2Q15562 447 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 TMEM119Q4V9L6 283 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 ARL6IP4Q66PJ3 421 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 FAM3CQ92520 227 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 KCNN1Q92952 543 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 IFT43Q96FT9 208 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 BICD1Q96G01 975 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 CDK5RAP3Q96JB5 506 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 LRRC3Q9BY71 257 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 GPR88Q9GZN0 384 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 TRPV4Q9HBA0 871 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 PRMT8Q9NR22 394 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 DLL3Q9NYJ7 618 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 NCDNQ9UBB6 729 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
TUBA1B-205ENST00000549870 MIA3Q5JRA6 1907 aa13.02□□□□□ -0.32
TUBA1B-205ENST00000549870 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 HEPACAM2A8MVW5 462 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 ZNF263O14978 683 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 LIG4P49917 911 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 DUSP4Q13115 394 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 GPR17Q13304 367 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 KYAT1Q16773 422 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 USP37Q86T82 979 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 SHKBP1Q8TBC3 707 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 FAM126AQ9BYI3 521 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 EPC1Q9H2F5 836 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 CHRDQ9H2X0 955 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 LMAN1LQ9HAT1 526 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 TBX20Q9UMR3 447 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 EP300Q09472 2414 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-205ENST00000549870 OGTO15294 1046 aa13.01□□□□□ -0.33
TUBA1B-205ENST00000549870 XPOTO43592 962 aaKnown RBP13.01□□□□□ -0.33
TUBA1B-205ENST00000549870 FAM189A1O60320 539 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms