RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 FOXN3O00409 490 aaPredicted RBP22.57■■□□□ 1.2
VPS29-206ENST00000549578 GTF2F1P35269 517 aaKnown RBP eCLIP22.57■■□□□ 1.2
VPS29-206ENST00000549578 DUSP6Q16828 381 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 MDH1BQ5I0G3 518 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 DCP1BQ8IZD4 617 aaKnown RBP22.57■■□□□ 1.2
VPS29-206ENST00000549578 MICALL1Q8N3F8 863 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 TMEM176AQ96HP8 235 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 CEP72Q9P209 647 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 PLXNA3P51805 1871 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 F8VZ95 297 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 TGM5O43548 720 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 GPR17Q13304 367 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 FAM171BQ6P995 826 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 CACNA2D4Q7Z3S7 1137 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 VSTM4Q8IW00 320 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 CRYBG2Q8N1P7 616 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 C12orf29Q8N999 325 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 PPP2R3CQ969Q6 453 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 TTYH3Q9C0H2 523 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 IGFLR1Q9H665 355 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 CNTN6Q9UQ52 1028 aa22.57■■□□□ 1.2
VPS29-206ENST00000549578 ITIH6Q6UXX5 1313 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 VNN2O95498 520 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 CALCAP01258 141 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 SPATA31D3P0C874 917 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 CLCN4P51793 760 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 ZNF132P52740 706 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 JAM2P57087 298 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 HYAL1Q12794 435 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 SPATA31D4Q6ZUB0 917 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 GPIHBP1Q8IV16 184 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 ZNF461Q8TAF7 563 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 MYLPFQ96A32 169 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 HEXIM2Q96MH2 286 aaKnown RBP22.56■■□□□ 1.2
VPS29-206ENST00000549578 SPAG5Q96R06 1193 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 GRPEL1Q9HAV7 217 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 FAM49BQ9NUQ9 324 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 DAAM1Q9Y4D1 1078 aa22.56■■□□□ 1.2
VPS29-206ENST00000549578 MTMR11A4FU01 709 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 ABLIM3O94929 683 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 GLUD1P00367 558 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 EPCAMP16422 314 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 RBM10P98175 930 aaKnown RBP22.55■■□□□ 1.2
VPS29-206ENST00000549578 ADCY1Q08828 1119 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 SPECC1LQ69YQ0 1117 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 LLGL2Q6P1M3 1020 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 LILRA6Q6PI73 481 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 ATAD1Q8NBU5 361 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 MYCBPAPQ8TBZ2 947 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 SLC22A17Q8WUG5 538 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 PCED1BQ96HM7 432 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 ACP6Q9NPH0 428 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 ABI2Q9NYB9 513 aaPredicted RBP22.55■■□□□ 1.2
VPS29-206ENST00000549578 HCFC2Q9Y5Z7 792 aa22.55■■□□□ 1.2
VPS29-206ENST00000549578 CYP26A1O43174 497 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 CCDC130P13994 396 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 FOSL2P15408 326 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 CYP27A1Q02318 531 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 FIGNQ5HY92 759 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 TPGS2Q68CL5 300 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 PPFIBP1Q86W92 1011 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 FAM71AQ8IYT1 594 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 TTC9BQ8N6N2 239 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 BAP1Q92560 729 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 MRFAP1L1Q96HT8 127 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 NUP58Q9BVL2 599 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 RHOBTB2Q9BYZ6 727 aa22.54■■□□□ 1.2
VPS29-206ENST00000549578 AFF4Q9UHB7 1163 aaKnown RBP22.54■■□□□ 1.2
VPS29-206ENST00000549578 CLDN5O00501 218 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 GYPCP04921 128 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 ATF2P15336 505 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 CD19P15391 556 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 MAPRE1Q15691 268 aaKnown RBP22.53■■□□□ 1.2
VPS29-206ENST00000549578 NFE2Q16621 373 aaPredicted RBP22.53■■□□□ 1.2
VPS29-206ENST00000549578 VN1R2Q8NFZ6 395 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 CPLX3Q8WVH0 158 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 CDCA3Q99618 268 aaPredicted RBP22.53■■□□□ 1.2
VPS29-206ENST00000549578 B3GNT5Q9BYG0 378 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 DNAI2Q9GZS0 605 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 CRISPLD1Q9H336 500 aa22.53■■□□□ 1.2
VPS29-206ENST00000549578 SEC24AO95486 1093 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 ADCY5O95622 1261 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 PAEPP09466 180 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 DUSP4Q13115 394 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 TMC6Q7Z403 805 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 SPATA2LQ8IUW3 424 aaPredicted RBP22.52■■□□□ 1.2
VPS29-206ENST00000549578 KREMEN2Q8NCW0 462 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 SLC2A14Q8TDB8 520 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 TFAP2BQ92481 460 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 FBXW11Q9UKB1 542 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 SLC27A5Q9Y2P5 690 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 PCDHB5Q9Y5E4 795 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.52■■□□□ 1.2
VPS29-206ENST00000549578 EYSQ5T1H1 3165 aa22.52■■□□□ 1.2
VPS29-206ENST00000549578 LINC01565O15544 149 aa22.52■■□□□ 1.19
VPS29-206ENST00000549578 GFPT2O94808 682 aa22.52■■□□□ 1.19
VPS29-206ENST00000549578 BRD2P25440 801 aaKnown RBP22.52■■□□□ 1.19
VPS29-206ENST00000549578 CLCN1P35523 988 aa22.52■■□□□ 1.19
VPS29-206ENST00000549578 SOX5P35711 763 aa22.52■■□□□ 1.19
VPS29-206ENST00000549578 STAT1P42224 750 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms