RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 AK8Q96MA6 479 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
DDX54-206ENST00000549271 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 APC2O95996 2303 aa13.22□□□□□ -0.29
DDX54-206ENST00000549271 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ADAMTS9Q9P2N4 1935 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 H0YCG3 227 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 M0QZQ0 153 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 CLDN3O15551 220 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 SLC26A4O43511 780 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 OAZ2O95190 189 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 BMP15O95972 392 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 DRD1P21728 446 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 SCP2P22307 547 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 LRPAP1P30533 357 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 EPHB3P54753 998 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 LMAN2Q12907 356 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 SEMA3BQ13214 749 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 RUNX3Q13761 415 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 DMC1Q14565 340 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ZBTB6Q15916 424 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ARSHQ5FYA8 562 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
DDX54-206ENST00000549271 CHCHD4Q8N4Q1 142 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ADAM32Q8TC27 787 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 TSPAN18Q96SJ8 248 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 GKN1Q9NS71 199 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
DDX54-206ENST00000549271 CACNA2D2Q9NY47 1150 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 INVSQ9Y283 1065 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 GON4LQ3T8J9 2241 aa13.21□□□□□ -0.29
DDX54-206ENST00000549271 OBSL1O75147 1896 aa13.21□□□□□ -0.3
DDX54-206ENST00000549271 PLXND1Q9Y4D7 1925 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 FGF19O95750 216 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 CLTAP09496 248 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 CYP3A5P20815 502 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 BCKDHBP21953 392 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 GABRR2P28476 465 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 MCM4P33991 863 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 LONP1P36776 959 aaKnown RBP13.2□□□□□ -0.3
DDX54-206ENST00000549271 AARSP49588 968 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX54-206ENST00000549271 GALK1P51570 392 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 DGKEP52429 567 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 SCAPQ12770 1279 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 DUSP4Q13115 394 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 KYAT1Q16773 422 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 ARHGAP15Q53QZ3 475 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
DDX54-206ENST00000549271 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
DDX54-206ENST00000549271 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 BLOC1S4Q9NUP1 217 aa13.2□□□□□ -0.3
DDX54-206ENST00000549271 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
DDX54-206ENST00000549271 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 STX6O43752 255 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 PIGRP01833 764 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 ADRB2P07550 413 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 HARSP12081 509 aaKnown RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 PAX3P23760 479 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 UBA7P41226 1012 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 RAD51AP2Q09MP3 1159 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 TRIM61Q5EBN2 209 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 PIGKQ92643 395 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 ACDQ96AP0 544 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 SMG9Q9H0W8 520 aaKnown RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 EBF3Q9H4W6 596 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 UBQLN1Q9UMX0 589 aaKnown RBP13.19□□□□□ -0.3
DDX54-206ENST00000549271 ASXL3Q9C0F0 2248 aa13.19□□□□□ -0.3
DDX54-206ENST00000549271 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 FAM189A1O60320 539 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 CXCL8P10145 99 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 PLCG1P19174 1290 aa13.18□□□□□ -0.3
DDX54-206ENST00000549271 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms