RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 DEFB103AP81534 67 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 HTRA4P83105 476 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-222ENST00000544585 ZP2Q05996 745 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 GPM6BQ13491 265 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 DGKDQ16760 1214 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 EPC2Q52LR7 807 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-222ENST00000544585 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 FSTL4Q6MZW2 842 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 SPRED2Q7Z698 418 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 SH3RF2Q8TEC5 729 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 EDAQ92838 391 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 C17orf80Q9BSJ5 609 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 KATNAL1Q9BW62 490 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 OSBPL1AQ9BXW6 950 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 NSUN3Q9H649 340 aaKnown RBP6.98□□□□□ -1.29
CPSF7-222ENST00000544585 KCNH7Q9NS40 1196 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
CPSF7-222ENST00000544585 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 TAGLN3Q9UI15 199 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 INTUQ9ULD6 942 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 PLAGL2Q9UPG8 496 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 SNX11Q9Y5W9 270 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 DDX49Q9Y6V7 483 aaKnown RBP6.98□□□□□ -1.29
CPSF7-222ENST00000544585 CHD7Q9P2D1 2997 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 NAV1Q8NEY1 1877 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 EMSYQ7Z589 1322 aa6.98□□□□□ -1.29
CPSF7-222ENST00000544585 TET1Q8NFU7 2136 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 A0A1W2PQ27 194 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 A0A1W2PQ64 194 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 A0A1W2PQC6 194 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 A0A1W2PQD8 194 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 H3BQ06 376 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 CCER2I3L3R5 266 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 MAFKO60675 156 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 ESR1P03372 595 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 NOVP48745 357 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 RPS6P62753 249 aaKnown RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 PPARAQ07869 468 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 ADCY1Q08828 1119 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 STXBP2Q15833 593 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 ESRP1Q6NXG1 681 aaKnown RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 CCDC62Q6P9F0 684 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 TMCO2Q7Z6W1 182 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 C11orf96Q7Z7L8 435 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 AFG1LQ8WV93 481 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 DLG3Q92796 817 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 KAT2BQ92831 832 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 TOP1MTQ969P6 601 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 E2F7Q96AV8 911 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 IWS1Q96ST2 819 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 ELAC2Q9BQ52 826 aaKnown RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 LRRCC1Q9C099 1032 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 RNF38Q9H0F5 515 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 NAPBQ9H115 298 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 ATP13A1Q9HD20 1204 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 IL17RBQ9NRM6 502 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 BAHCC1Q9P281 2608 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 HDAC6Q9UBN7 1215 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 DDX19BQ9UMR2 479 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 DAAM1Q9Y4D1 1078 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 GPR45Q9Y5Y3 372 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 MYH8P13535 1937 aa6.97□□□□□ -1.29
CPSF7-222ENST00000544585 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
CPSF7-222ENST00000544585 PLIN4Q96Q06 1357 aa6.96□□□□□ -1.29
CPSF7-222ENST00000544585 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.29
CPSF7-222ENST00000544585 RSPH10B2B2RC85 870 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 NFIBO00712 420 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 MMP3P08254 477 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 RSPH10BP0C881 870 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 AGXTP21549 392 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 ENPP1P22413 925 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 SLC16A2P36021 539 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 ADKP55263 362 aaKnown RBP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 CCDC96Q2M329 555 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 TCEAL5Q5H9L2 206 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 TOR2AQ5JU69 321 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 ZNF618Q5T7W0 954 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 SEPT14Q6ZU15 432 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 APBB1IPQ7Z5R6 666 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 CATIPQ7Z7H3 387 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 MYOCDQ8IZQ8 938 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 LZTR1Q8N653 840 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 DBF4BQ8NFT6 615 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 PLEKHO2Q8TD55 490 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 NETO1Q8TDF5 533 aa6.96□□□□□ -1.3
CPSF7-222ENST00000544585 NSUN6Q8TEA1 469 aaKnown RBP6.96□□□□□ -1.3
CPSF7-222ENST00000544585 CLEC4DQ8WXI8 215 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms