RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 USP1O94782 785 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 LRIG2O94898 1065 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 CD3EP07766 207 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 CNPP09543 421 aaKnown RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 ALAS1P13196 640 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TYRP14679 529 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KCNMA1Q12791 1236 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 STK4Q13043 487 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 IFT88Q13099 833 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TMED1Q13445 227 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 LSAMPQ13449 338 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 MAMLD1Q13495 774 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 IL10RAQ13651 578 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SEMA3AQ14563 771 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 MYBPC3Q14896 1274 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 PPA1Q15181 289 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 ADIPOQQ15848 244 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 ADRM1Q16186 407 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KYNUQ16719 465 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 AMOTQ4VCS5 1084 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 PLEKHO1Q53GL0 409 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 EEF1DP3Q658K8 133 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KLHL17Q6TDP4 642 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 ARHGAP36Q6ZRI8 547 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SZRD1Q7Z422 152 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 ANKS1BQ7Z6G8 1248 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 UBE3DQ7Z6J8 389 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 GATAD2AQ86YP4 633 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 LYSMD2Q8IV50 215 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KSR1Q8IVT5 923 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 CEP97Q8IW35 865 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SLC44A2Q8IWA5 706 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KCTD6Q8NC69 237 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 C3orf20Q8ND61 904 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 DENND1AQ8TEH3 1009 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 AFG1LQ8WV93 481 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KAT5Q92993 513 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TNFRSF25Q93038 417 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 FATE1Q969F0 183 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 RNF125Q96EQ8 232 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SNX22Q96L94 193 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 MRGPRX1Q96LB2 322 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 CCDC43Q96MW1 224 aaKnown RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 DPH1Q9BZG8 443 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 PNNQ9H307 717 aaKnown RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 PABPC3Q9H361 631 aaKnown RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 PRDM12Q9H4Q4 367 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 PRDM8Q9NQV8 689 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 KCNH7Q9NS40 1196 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 LMBRD1Q9NUN5 540 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TBCCD1Q9NVR7 557 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.01□□□□□ -1.45
DDB1-219ENST00000541513 TBC1D14Q9P2M4 693 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 ADGRE2Q9UHX3 823 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SMC3Q9UQE7 1217 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 DTNAQ9Y4J8 743 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 PCDHB1Q9Y5F3 818 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 EPN1Q9Y6I3 576 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 DOT1LQ8TEK3 1739 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 TOGARAM1Q9Y4F4 1720 aa6.01□□□□□ -1.45
DDB1-219ENST00000541513 SIPA1L3O60292 1781 aaPredicted RBP6.01□□□□□ -1.45
DDB1-219ENST00000541513 PCDH11XQ9BZA7 1347 aa6□□□□□ -1.45
DDB1-219ENST00000541513 PCDH11YQ9BZA8 1340 aa6□□□□□ -1.45
DDB1-219ENST00000541513 IRS2Q9Y4H2 1338 aa6□□□□□ -1.45
DDB1-219ENST00000541513 LOC100289279A0A1B0GTE1 492 aa6□□□□□ -1.45
DDB1-219ENST00000541513 SH2B2O14492 632 aaPredicted RBP6□□□□□ -1.45
DDB1-219ENST00000541513 FMO6PO60774 539 aa6□□□□□ -1.45
DDB1-219ENST00000541513 BEST1O76090 585 aa6□□□□□ -1.45
DDB1-219ENST00000541513 APBB3O95704 486 aa6□□□□□ -1.45
DDB1-219ENST00000541513 GUCA1CO95843 209 aa6□□□□□ -1.45
DDB1-219ENST00000541513 MT-ND5P03915 603 aa6□□□□□ -1.45
DDB1-219ENST00000541513 CLEC3BP05452 202 aa6□□□□□ -1.45
DDB1-219ENST00000541513 HMOX1P09601 288 aa6□□□□□ -1.45
DDB1-219ENST00000541513 BCRP11274 1271 aa6□□□□□ -1.45
DDB1-219ENST00000541513 SFTPCP11686 197 aa6□□□□□ -1.45
DDB1-219ENST00000541513 EEF2P13639 858 aaKnown RBP6□□□□□ -1.45
DDB1-219ENST00000541513 KRT15P19012 456 aa6□□□□□ -1.45
DDB1-219ENST00000541513 PAMP19021 973 aa6□□□□□ -1.45
DDB1-219ENST00000541513 ABCD3P28288 659 aa6□□□□□ -1.45
DDB1-219ENST00000541513 GABRB3P28472 473 aa6□□□□□ -1.45
DDB1-219ENST00000541513 TM4SF1P30408 202 aa6□□□□□ -1.45
DDB1-219ENST00000541513 ARL3P36405 182 aa6□□□□□ -1.45
DDB1-219ENST00000541513 HADHAP40939 763 aa6□□□□□ -1.45
DDB1-219ENST00000541513 RGS2P41220 211 aa6□□□□□ -1.45
DDB1-219ENST00000541513 MCAMP43121 646 aa6□□□□□ -1.45
DDB1-219ENST00000541513 ARFIP2P53365 341 aa6□□□□□ -1.45
DDB1-219ENST00000541513 PRKAA2P54646 552 aa6□□□□□ -1.45
DDB1-219ENST00000541513 DLG4P78352 724 aa6□□□□□ -1.45
DDB1-219ENST00000541513 CUL4BQ13620 913 aa6□□□□□ -1.45
DDB1-219ENST00000541513 SPIDRQ14159 915 aa6□□□□□ -1.45
DDB1-219ENST00000541513 WDR43Q15061 677 aaKnown RBP eCLIP6□□□□□ -1.45
DDB1-219ENST00000541513 NR0B2Q15466 257 aa6□□□□□ -1.45
DDB1-219ENST00000541513 TMEM266Q2M3C6 531 aa6□□□□□ -1.45
DDB1-219ENST00000541513 NAA35Q5VZE5 725 aa6□□□□□ -1.45
DDB1-219ENST00000541513 RAB12Q6IQ22 244 aa6□□□□□ -1.45
DDB1-219ENST00000541513 KLHL10Q6JEL2 608 aa6□□□□□ -1.45
DDB1-219ENST00000541513 FAM117BQ6P1L5 589 aa6□□□□□ -1.45
DDB1-219ENST00000541513 KRT27Q7Z3Y8 459 aa6□□□□□ -1.45
DDB1-219ENST00000541513 PXKQ7Z7A4 578 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms