RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 BTN3A1O00481 513 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 THP07101 528 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 GRPP07492 148 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 CHRM3P20309 590 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 PEX2P28328 305 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 KCNJ5P48544 419 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 SLC11A2P49281 568 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 ZNF134P52741 427 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
RAP1B-224ENST00000541216 POLD3Q15054 466 aaPredicted RBP5.43□□□□□ -1.54
RAP1B-224ENST00000541216 PTPAQ15257 358 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 SLC30A10Q6XR72 485 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 Q6YL49 198 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 LNX2Q8N448 690 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 APIPQ96GX9 242 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 HEPHQ9BQS7 1158 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 CPNE7Q9UBL6 633 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 TPCN1Q9ULQ1 816 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 COX11Q9Y6N1 276 aa5.43□□□□□ -1.54
RAP1B-224ENST00000541216 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 TOR1BO14657 336 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 ITGAMP11215 1152 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 TRIM27P14373 513 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 VIPR2P41587 438 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 GCLCP48506 637 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-224ENST00000541216 UCP3P55916 312 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 TBX4P57082 545 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 FMO1Q01740 532 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 FPGSQ05932 587 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 CTBP1Q13363 440 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 HLTFQ14527 1009 aaKnown RBP eCLIP5.42□□□□□ -1.54
RAP1B-224ENST00000541216 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 MICU3Q86XE3 530 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 FAM9AQ8IZU1 332 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-224ENST00000541216 KRT78Q8N1N4 520 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 FAM109AQ8N4B1 249 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 OR6B3Q8NGW1 331 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 SSH3Q8TE77 659 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 TTC17Q96AE7 1141 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 SLC46A1Q96NT5 459 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 INTS13Q9NVM9 706 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 PCDHGB6Q9Y5F9 930 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 EPN1Q9Y6I3 576 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-224ENST00000541216 MAST3O60307 1309 aa5.42□□□□□ -1.54
RAP1B-224ENST00000541216 TRIM43BA6NCK2 446 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 IKBKBO14920 756 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SRGNP10124 158 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SLC5A1P13866 664 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 NPTX2P47972 431 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SUMO3P55854 103 aaPredicted RBP5.41□□□□□ -1.54
RAP1B-224ENST00000541216 TAP1Q03518 808 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 CNGA2Q16280 664 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 CCDC181Q5TID7 509 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 ZNF783Q6ZMS7 281 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 DNAJC5GQ8N7S2 189 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 BEND2Q8NDZ0 799 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SLC30A5Q8TAD4 765 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 LPIN2Q92539 896 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SNX19Q92543 992 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 TRIM43Q96BQ3 446 aaPredicted RBP5.41□□□□□ -1.54
RAP1B-224ENST00000541216 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
RAP1B-224ENST00000541216 SUCLG2Q96I99 432 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 Q96MF0 132 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 TBCCD1Q9NVR7 557 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 XPR1Q9UBH6 696 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 RAD54BQ9Y620 910 aa5.41□□□□□ -1.54
RAP1B-224ENST00000541216 TMEM233B4DJY2 109 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 APAF1O14727 1248 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 PROM1O43490 865 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 SOAT2O75908 522 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 MPLP40238 635 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 NDUFV1P49821 464 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 BLOC1S1P78537 153 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 FOXI1Q12951 378 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 SLC13A2Q13183 592 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 AMOTQ4VCS5 1084 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 KIAA0895LQ68EN5 471 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 VWA1Q6PCB0 445 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 OLFML1Q6UWY5 402 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 SESTD1Q86VW0 696 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 NMD3Q96D46 503 aaKnown RBP5.4□□□□□ -1.54
RAP1B-224ENST00000541216 OSBPL9Q96SU4 736 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 MESP1Q9BRJ9 268 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 KRTAP1-5Q9BYS1 174 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 LRRC27Q9C0I9 530 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 BTBD1Q9H0C5 482 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 TOR3AQ9H497 397 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 ALG13Q9NP73 1137 aaKnown RBP5.4□□□□□ -1.54
RAP1B-224ENST00000541216 KCTD5Q9NXV2 234 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 COL20A1Q9P218 1284 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 TMX2Q9Y320 296 aa5.4□□□□□ -1.54
RAP1B-224ENST00000541216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.54
RAP1B-224ENST00000541216 SETD1BQ9UPS6 1966 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms