RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LEO1Q8WVC0 666 aaPredicted RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 CHAMP1Q96JM3 812 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 KIF2CQ99661 725 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 SEPT5Q99719 369 aaPredicted RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 REEP2Q9BRK0 252 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 EBF3Q9H4W6 596 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 ASB7Q9H672 318 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 RPF1Q9H9Y2 349 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 KIF9Q9HAQ2 790 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 TDP1Q9NUW8 608 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 TMLHEQ9NVH6 421 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 THG1LQ9NWX6 298 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 LARSQ9P2J5 1176 aaKnown RBP7.9□□□□□ -1.14
YBX3-209ENST00000540747 DSEQ9UL01 958 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 ODF2LQ9ULJ1 636 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 SLC8A2Q9UPR5 921 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 C2CD2Q9Y426 696 aa7.9□□□□□ -1.14
YBX3-209ENST00000540747 SMG1Q96Q15 3661 aaKnown RBP7.9□□□□□ -1.15
YBX3-209ENST00000540747 MYH11P35749 1972 aa7.9□□□□□ -1.15
YBX3-209ENST00000540747 ASCC3Q8N3C0 2202 aaKnown RBP7.89□□□□□ -1.15
YBX3-209ENST00000540747 LNP1A1A4G5 178 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 C1QTNF9BB2RNN3 333 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 TISP43B9A030 160 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 ANKRD63C9JTQ0 380 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GIPC1O14908 333 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 DCLK1O15075 740 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 SLC26A4O43511 780 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 NOL4O94818 638 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 SEC24BO95487 1268 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 APBB3O95704 486 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 C1QTNF9P0C862 333 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 CCDC192P0DO97 292 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 TCF3P15923 654 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GPR15P49685 360 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 LIG4P49917 911 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GALK1P51570 392 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GTF2BQ00403 316 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 TMEM132DQ14C87 1099 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 PDGFRLQ15198 375 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GAB4Q2WGN9 574 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 MGAT5BQ3V5L5 792 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 FBXO43Q4G163 708 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 WSCD1Q658N2 575 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 PMS2CLQ68D20 193 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 RNF43Q68DV7 783 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 TXNDC8Q6A555 127 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
YBX3-209ENST00000540747 RASSF3Q86WH2 238 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 EFCAB13Q8IY85 973 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 ABCA7Q8IZY2 2146 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 MAB21L3Q8N8X9 362 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 BICD1Q96G01 975 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 TRMT2BQ96GJ1 504 aaKnown RBP7.89□□□□□ -1.15
YBX3-209ENST00000540747 MYRFLQ96LU7 910 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GCNAQ96QF7 691 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 HHIPQ96QV1 700 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 P2RY13Q9BPV8 354 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 MSTO1Q9BUK6 570 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 EDEM2Q9BV94 578 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 ST6GALNAC4Q9H4F1 302 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 BLOC1S4Q9NUP1 217 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 GCNT4Q9P109 453 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 ATG2BQ96BY7 2078 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 IGSF10Q6WRI0 2623 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 MYO16Q9Y6X6 1858 aa7.89□□□□□ -1.15
YBX3-209ENST00000540747 CYB561D2O14569 222 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 CDX4O14627 284 aaPredicted RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 PPP1R37O75864 691 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 CSRP1P21291 193 aaKnown RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 AVPR1AP37288 418 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 TAF6P49848 677 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 CDR1P51861 262 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 WNT7BP56706 349 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 FAM160A1Q05DH4 1040 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 DMC1Q14565 340 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 MTF1Q14872 753 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 KARSQ15046 597 aaKnown RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 EML3Q32P44 896 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 ARL6IP4Q66PJ3 421 aaKnown RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 SCARA3Q6AZY7 606 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 UNQ6494/PRO21346Q6UXR6 183 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 LIMS2Q7Z4I7 341 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 RPLP0P6Q8NHW5 317 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 OLIG1Q8TAK6 271 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 OSCP1Q8WVF1 389 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 GATA6Q92908 595 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 ACDQ96AP0 544 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 ZSCAN31Q96LW9 406 aaPredicted RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 IPO9Q96P70 1041 aaKnown RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 PLIN2Q99541 437 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 PYM1Q9BRP8 204 aaKnown RBP7.88□□□□□ -1.15
YBX3-209ENST00000540747 STRA6Q9BX79 667 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 TMEM206Q9H813 350 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 ECT2Q9H8V3 914 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 PARVGQ9HBI0 331 aa7.88□□□□□ -1.15
YBX3-209ENST00000540747 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms