RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 GSG1L2A8MUP6 293 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 RASSF9O75901 435 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 APOA4P06727 396 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 MMP10P09238 476 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PDK1Q15118 436 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 CHI3L2Q15782 390 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 PCSK7Q16549 785 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 IL31Q6EBC2 164 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 ZCWPW1Q9H0M4 648 aa10.36□□□□□ -0.75
COL4A6-208ENST00000538570 KIF1BO60333 1816 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 TRPC5OSA6NMA1 111 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 USP1O94782 785 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 PSMA3P25788 255 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 STAT5BP51692 787 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CCZ1BP86790 482 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CCZ1P86791 482 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CDC42EP1Q00587 391 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 TP53BP2Q13625 1128 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 PTK6Q13882 451 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CCDC60Q8IWA6 550 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 OSBPL8Q9BZF1 889 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 PIM2Q9P1W9 311 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 SNX9Q9Y5X1 595 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CDHR2Q9BYE9 1310 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 RPS6KA4O75676 772 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 DPYDQ12882 1025 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ARHGEF7Q14155 803 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 TTC33Q6PID6 262 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 NLRP9Q7RTR0 991 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 GPR141Q7Z602 305 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 PABPC5Q96DU9 382 aaKnown RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 VPS33BQ9H267 617 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CATSPERBQ9H7T0 1116 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CAAP1Q9H8G2 361 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 E2F8A0AVK6 867 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ITGA8P53708 1063 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CSTF3Q12996 717 aaKnown RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 SNX17Q15036 470 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CCDC81Q6ZN84 652 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 TRAPPC11Q7Z392 1133 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 SUN5Q8TC36 379 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 MOV10L1Q9BXT6 1211 aaKnown RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 IRX2Q9BZI1 471 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 RSAD1Q9HA92 442 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 CARD8Q9Y2G2 431 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 SCTRP47872 440 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
COL4A6-208ENST00000538570 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 HPS3Q969F9 1004 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ZIM3Q96PE6 472 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 IPPQ9Y573 584 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 RNF103O00237 685 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 AHCYL1O43865 530 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 DGAT1O75907 488 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ACOT2P49753 483 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 SLC25A41Q8N5S1 370 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ISCUQ9H1K1 167 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 MBD2Q9UBB5 411 aa10.35□□□□□ -0.75
COL4A6-208ENST00000538570 ASNA1O43681 348 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 HOXD10P28358 340 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ARL4DP49703 201 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ADARP55265 1226 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 SNRNP35Q16560 246 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 SUGP1Q8IWZ8 645 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 SPATA18Q8TC71 538 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 RXRBP28702 533 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ACADSBP45954 432 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 GEMIN4P57678 1058 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 NR1I3Q14994 352 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 PACS2Q86VP3 889 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 MSL3Q8N5Y2 521 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 OR6J1Q8NGC5 347 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 CAPSLQ8WWF8 208 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 CCDC28BQ9BUN5 200 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 AP4S1Q9Y587 144 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 GUCY1B2O75343 617 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 RHOBTB3O94955 611 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 PRLP01236 227 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 HMBSP08397 361 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 MLNP12872 115 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 CENPAP49450 140 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 COPAP53621 1224 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 LAYNQ6UX15 382 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 PPIL6Q8IXY8 311 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 REEP2Q9BRK0 252 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 GOLPH3Q9H4A6 298 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 HPS4Q9NQG7 708 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms