RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
ABCA4-207ENST00000536513 OR1G1P47890 313 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 SLC26A2P50443 739 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 TARBP2Q15633 366 aaKnown RBP8.69□□□□□ -1.02
ABCA4-207ENST00000536513 MEA1Q16626 185 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 SLC10A6Q3KNW5 377 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 ZACNQ401N2 412 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 FAM102AQ5T9C2 384 aaPredicted RBP8.69□□□□□ -1.02
ABCA4-207ENST00000536513 BSPRYQ5W0U4 402 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 BRSK2Q8IWQ3 736 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 C1orf127Q8N9H9 656 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 KAT2BQ92831 832 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 CGRRF1Q99675 332 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 KIF9Q9HAQ2 790 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 PTCH2Q9Y6C5 1203 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 DLEC1Q9Y238 1755 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 NRCAMQ92823 1304 aa8.69□□□□□ -1.02
ABCA4-207ENST00000536513 CLDN5O00501 218 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 KRT10P13645 584 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 NDST1P52848 882 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 EPHB4P54760 987 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 RPL7AP62424 266 aaKnown RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ITGA7Q13683 1181 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 TRADDQ15628 312 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SGSM1Q2NKQ1 1148 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CAPRIN2Q6IMN6 1127 aaKnown RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 PRUNE1Q86TP1 453 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 PAF1Q8N7H5 531 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 NIF3L1Q9GZT8 377 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 TTC7AQ9ULT0 858 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 UBE4BO95155 1302 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 FOCADQ5VW36 1801 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 HUS1O60921 280 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CCDC130P13994 396 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 PSMD6Q15008 389 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SEL1L2Q5TEA6 688 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 NLRP14Q86W24 1093 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 LMNTD2Q8IXW0 634 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 GPR152Q8TDT2 470 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 WNT8BQ93098 351 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ARL8AQ96BM9 186 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SPOCK3Q9BQ16 436 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 NTPCRQ9BSD7 190 aaKnown RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 MTG1Q9BT17 334 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SLC40A1Q9NP59 571 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 GPATCH2LQ9NWQ4 482 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SBF1O95248 1867 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 RRN3P2A6NIE6 340 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CAPN9O14815 690 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ASAP2O43150 1006 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ZNF16P17020 682 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CDC25CP30307 473 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 GRK4P32298 578 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 POLE2P56282 527 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 BEST2Q8NFU1 509 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 MAGOHBQ96A72 148 aaKnown RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 AIPL1Q9NZN9 384 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 SAE1Q9UBE0 346 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-207ENST00000536513 ASIC3Q9UHC3 531 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 CDH23Q9H251 3354 aa8.68□□□□□ -1.02
ABCA4-207ENST00000536513 F8W810 466 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 O00370 1275 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 DNAJB2P25686 324 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 DHX9Q08211 1270 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 NME3Q13232 169 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 SEPT7Q16181 437 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 SWT1Q5T5J6 900 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 SDHAF4Q5VUM1 108 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 CCNI2Q6ZMN8 369 aaPredicted RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 ZMAT2Q96NC0 199 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 PAAF1Q9BRP4 392 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 TRIM51Q9BSJ1 452 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 AGO3Q9H9G7 860 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 STIM2Q9P246 746 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 DMGDHQ9UI17 866 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 LRFN2Q9ULH4 789 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 SNX12Q9UMY4 172 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 PCDHB2Q9Y5E7 798 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 ARFGEF1Q9Y6D6 1849 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 KBTBD13C9JR72 458 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 P4HA1P13674 534 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 PSMA2P25787 234 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 BRCC3P46736 316 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 SESN3P58005 492 aa8.67□□□□□ -1.02
ABCA4-207ENST00000536513 PURAQ00577 322 aaKnown RBP8.67□□□□□ -1.02
ABCA4-207ENST00000536513 FIGNQ5HY92 759 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms