RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 CUL2Q13617 745 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 CCDC142Q17RM4 750 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 PTCRAQ6ISU1 281 aaPredicted RBP25.8■■□□□ 1.72
SIPA1-210ENST00000534406 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.8■■□□□ 1.72
SIPA1-210ENST00000534406 TTC39CQ8N584 583 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 B3GALNT2Q8NCR0 500 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 EHBP1Q8NDI1 1231 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.8■■□□□ 1.72
SIPA1-210ENST00000534406 MYLPFQ96A32 169 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 TNIP3Q96KP6 325 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 ARID3AQ99856 593 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 CRACR2AQ9BSW2 395 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 RHOBTB2Q9BYZ6 727 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 HSD3B7Q9H2F3 369 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 DPEP3Q9H4B8 488 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 FAM124BQ9H5Z6 455 aaPredicted RBP25.8■■□□□ 1.72
SIPA1-210ENST00000534406 CRTAC1Q9NQ79 661 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 HSFX1Q9UBD0 423 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 GTF3C4Q9UKN8 822 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 YIPF1Q9Y548 306 aa25.8■■□□□ 1.72
SIPA1-210ENST00000534406 MYBPHLA2RUH7 354 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 GRXCR2A6NFK2 248 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 ATP2C2O75185 946 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 PAPLNO95428 1278 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 LRG1P02750 347 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 POU2F2P09086 479 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 YWHAEP62258 255 aaKnown RBP25.79■■□□□ 1.72
SIPA1-210ENST00000534406 DUSP4Q13115 394 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 EXOC3L4Q17RC7 722 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 MDH1BQ5I0G3 518 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 FAM171BQ6P995 826 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 CYP26C1Q6V0L0 522 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 C4orf50Q6ZRC1 276 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 GPR149Q86SP6 731 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 SPATA2LQ8IUW3 424 aaPredicted RBP25.79■■□□□ 1.72
SIPA1-210ENST00000534406 PPM1KQ8N3J5 372 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 SMG7Q92540 1137 aaKnown RBP25.79■■□□□ 1.72
SIPA1-210ENST00000534406 ZNF707Q96C28 371 aaPredicted RBP25.79■■□□□ 1.72
SIPA1-210ENST00000534406 RIPOR3Q96MK2 946 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 PRKD2Q9BZL6 878 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 CRISPLD1Q9H336 500 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 CBX8Q9HC52 389 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 ABCB6Q9NP58 842 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 HMGXB4Q9UGU5 601 aa25.79■■□□□ 1.72
SIPA1-210ENST00000534406 PTPRDP23468 1912 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 CCL16O15467 120 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 XYLBO75191 536 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 PTPN1P18031 435 aaKnown RBP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 TRIM21P19474 475 aaKnown RBP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 CDK11BP21127 795 aaKnown RBP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 MTHFRP42898 656 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 KCNQ1P51787 676 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 PLD1Q13393 1074 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 IQCB1Q15051 598 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 TRIM65Q6PJ69 517 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 TTC9BQ8N6N2 239 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 MYCBPAPQ8TBZ2 947 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 FUBP3Q96I24 572 aaKnown RBP eCLIP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 SEPT5Q99719 369 aaPredicted RBP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 DNAI2Q9GZS0 605 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 CISHQ9NSE2 258 aa25.78■■□□□ 1.72
SIPA1-210ENST00000534406 LIMA1Q9UHB6 759 aaKnown RBP25.78■■□□□ 1.72
SIPA1-210ENST00000534406 CILPO75339 1184 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 CDR1P51861 262 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 TWF1Q12792 350 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 MGAT5BQ3V5L5 792 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 FAM200AQ8TCP9 573 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 SUSD6Q92537 303 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 NECTIN4Q96NY8 510 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 ASB2Q96Q27 587 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 NT5C1AQ9BXI3 368 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 VPS16Q9H269 839 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 PIDD1Q9HB75 910 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 SLC27A5Q9Y2P5 690 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 DENND4AQ7Z401 1863 aa25.77■■□□□ 1.72
SIPA1-210ENST00000534406 ATP1A3P13637 1013 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 TUFMP49411 452 aaKnown RBP25.76■■□□□ 1.71
SIPA1-210ENST00000534406 COPB1P53618 953 aaKnown RBP25.76■■□□□ 1.71
SIPA1-210ENST00000534406 TPM4P67936 248 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 CYP27A1Q02318 531 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 GCNT1Q02742 428 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 ORC1Q13415 861 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 CBX2Q14781 532 aaPredicted RBP25.76■■□□□ 1.71
SIPA1-210ENST00000534406 CFAP221Q4G0U5 840 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 ATAT1Q5SQI0 421 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 LRSAM1Q6UWE0 723 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 ACOT1Q86TX2 421 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 ARHGEF19Q8IW93 802 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 FEZF2Q8TBJ5 459 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 PCED1BQ96HM7 432 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 TWNKQ96RR1 684 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 TSPY26PQ9H489 355 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 CDH22Q9UJ99 828 aa25.76■■□□□ 1.71
SIPA1-210ENST00000534406 C5orf42Q9H799 3197 aa25.75■■□□□ 1.71
SIPA1-210ENST00000534406 ATP8B3O60423 1300 aa25.75■■□□□ 1.71
SIPA1-210ENST00000534406 HAPLN1P10915 354 aaPredicted RBP25.75■■□□□ 1.71
SIPA1-210ENST00000534406 SLC9A1P19634 815 aa25.75■■□□□ 1.71
SIPA1-210ENST00000534406 ALDH1A3P47895 512 aa25.75■■□□□ 1.71
SIPA1-210ENST00000534406 SMAD2Q15796 467 aaKnown RBP25.75■■□□□ 1.71
SIPA1-210ENST00000534406 LUZP1Q86V48 1076 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms