RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FAM86B1E9PN63 330 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 FAM86B2P0C5J1 330 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 EIF3EP60228 445 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 DHX34Q14147 1143 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 STARD3Q14849 445 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 TAS2R42Q7RTR8 314 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 BRSK2Q8IWQ3 736 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 CEP70Q8NHQ1 597 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 RIN2Q8WYP3 895 aaPredicted RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 ERGIC2Q96RQ1 377 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 STN1Q9H668 368 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 GTPBP10A4D1E9 387 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 ASMTLO95671 621 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 BST2Q10589 180 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 ATG16L1Q676U5 607 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 FRMD8P1Q9BZ68 369 aaPredicted RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 MRPL46Q9H2W6 279 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
AMBRA1-211ENST00000533727 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.524e-6■■■■■ 88
AMBRA1-211ENST00000533727 TMEM247A6NEH6 219 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 SLITRK3O94933 977 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 CXCR5P32302 372 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 SKA1Q96BD8 255 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 ZBTB18Q99592 522 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 SLC7A5P2Q9GIP4 190 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 LRRC37A3O60309 1634 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 MAPK13O15264 365 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 FGRP09769 529 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 NAB2Q15742 525 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 PTPN21Q16825 1174 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 TREML2Q5T2D2 321 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 ZDHHC17Q8IUH5 632 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 CYFIP2Q96F07 1278 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 LRGUKQ96M69 825 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.52
AMBRA1-211ENST00000533727 CNTNAP2Q9UHC6 1331 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 SEPT4O43236 478 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 TLR2O60603 784 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 TTC4O95801 387 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIP13Q15645 432 aaPredicted RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 USP49Q70CQ1 688 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 CBWD2Q8IUF1 395 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 MCEEQ96PE7 176 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 WDCPQ9H6R7 721 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 SAYSD1Q9NPB0 183 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 DDIT4Q9NX09 232 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 NSMCE4AQ9NXX6 385 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIM66O15016 1216 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 GGCXP38435 758 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 ARL4DP49703 201 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 HOMEZQ8IX15 550 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 CALML6Q8TD86 181 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 PPWD1Q96BP3 646 aaKnown RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 PABPC5Q96DU9 382 aaKnown RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 FRMD8Q9BZ67 464 aaPredicted RBP11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 INTS13Q9NVM9 706 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 GTF3C4Q9UKN8 822 aa11.77□□□□□ -0.53
AMBRA1-211ENST00000533727 SMIM35A0A1B0GVV1 85 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ATP5HO75947 161 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 MYL4P12829 197 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 IGFBP4P22692 258 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 PTGER2P43116 358 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SLCO1A2P46721 670 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CSGALNACT1Q8TDX6 532 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SMARCD1Q96GM5 515 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 RPRD1AQ96P16 312 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 BATF3Q9NR55 127 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 BARX2Q9UMQ3 279 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms