RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 SLC44A3Q8N4M1 653 aa12.71□□□□□ -0.38
CDC27-202ENST00000525495 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.38
CDC27-202ENST00000525495 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.38
CDC27-202ENST00000525495 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.38
CDC27-202ENST00000525495 ZNF334Q9HCZ1 680 aaPredicted RBP12.71□□□□□ -0.38
CDC27-202ENST00000525495 NXF1Q9UBU9 619 aaKnown RBP12.71□□□□□ -0.38
CDC27-202ENST00000525495 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.38
CDC27-202ENST00000525495 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.38
CDC27-202ENST00000525495 IKBKBO14920 756 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 COL9A1P20849 921 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 CYP2F1P24903 491 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 PCSK1P29120 753 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 ATICP31939 592 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 PSMC2P35998 433 aaKnown RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 EPHB3P54753 998 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 CDH8P55286 799 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SMARCB1Q12824 385 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 PLD1Q13393 1074 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 CYP4A22Q5TCH4 519 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 INTS8Q75QN2 995 aaKnown RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 ZC3H3Q8IXZ2 948 aaKnown RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SHKBP1Q8TBC3 707 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 GPR152Q8TDT2 470 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
CDC27-202ENST00000525495 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 SMYD3Q9H7B4 428 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 ASAH2Q9NR71 780 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 ZNF318Q5VUA4 2279 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 OBSL1O75147 1896 aa12.7□□□□□ -0.38
CDC27-202ENST00000525495 DENND4CQ5VZ89 1909 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 KMT2EQ8IZD2 1858 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 A0A1W2PRU2 124 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 BIN1O00499 593 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 ZNF197O14709 1029 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 LRRN2O75325 713 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 TACC1O75410 805 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 MICAL2O94851 1124 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 GCLMP48507 274 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
CDC27-202ENST00000525495 TNNC1P63316 161 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 MORC3Q14149 939 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 TEAD2Q15562 447 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 NFE2Q16621 373 aaPredicted RBP12.69□□□□□ -0.38
CDC27-202ENST00000525495 STXBP5Q5T5C0 1151 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 SPOPLQ6IQ16 392 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 GAREM2Q75VX8 874 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 BMP8AQ7Z5Y6 402 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 KXD1Q9BQD3 176 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 MMRN2Q9H8L6 949 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.69□□□□□ -0.383e-7■■■■■ 29.6
CDC27-202ENST00000525495 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 GREB1Q4ZG55 1949 aa12.69□□□□□ -0.38
CDC27-202ENST00000525495 PPP1R3GB7ZBB8 358 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 CETN3O15182 167 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 KRT13P13646 458 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 FCARP24071 287 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 GNL1P36915 607 aaPredicted RBP12.68□□□□□ -0.38
CDC27-202ENST00000525495 CAMK4Q16566 473 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 ZNF667Q5HYK9 610 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 FAM78AQ5JUQ0 283 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 TANGO2Q6ICL3 276 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 SCARA5Q6ZMJ2 495 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 FAM200AQ8TCP9 573 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 MKNK1Q9BUB5 465 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 SNX25Q9H3E2 840 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 COL4A3Q01955 1670 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 NCANO14594 1321 aa12.68□□□□□ -0.38
CDC27-202ENST00000525495 ASS1P00966 412 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms