RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 TBX20Q9UMR3 447 aa5.59□□□□□ -1.51
SDC2-206ENST00000521590 NBASA2RRP1 2371 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 PNMA6FA0A0J9YX94 578 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 DHX15O43143 795 aaKnown RBP5.58□□□□□ -1.52
SDC2-206ENST00000521590 TNFSF14O43557 240 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 KIF4AO95239 1232 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 FGAP02671 866 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 MYL4P12829 197 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 ITGA4P13612 1032 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 JUPP14923 745 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 FGFR3P22607 806 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 ACTN2P35609 894 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 TRAF1Q13077 416 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 RUNX3Q13761 415 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 HSP90AA2PQ14568 343 aaPredicted RBP5.58□□□□□ -1.52
SDC2-206ENST00000521590 PTPAQ15257 358 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 IGFBP7Q16270 282 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 PLEKHG6Q3KR16 790 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 BROXQ5VW32 411 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 SLCO4C1Q6ZQN7 724 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 USP49Q70CQ1 688 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 CATSPER4Q7RTX7 472 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 TCEAL8Q8IYN2 117 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 ENAHQ8N8S7 591 aaPredicted RBP5.58□□□□□ -1.52
SDC2-206ENST00000521590 ZNF248Q8NDW4 579 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 USP33Q8TEY7 942 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 LGMNQ99538 433 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 MXRA8Q9BRK3 442 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 SDF4Q9BRK5 362 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 KAT14Q9H8E8 782 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 IFT122Q9HBG6 1241 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
SDC2-206ENST00000521590 GKN1Q9NS71 199 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 TM7SF3Q9NS93 570 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 OBP2AQ9NY56 170 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 GMIPQ9P107 970 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 MMP17Q9ULZ9 603 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 CEP131Q9UPN4 1083 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 HES2Q9Y543 173 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 IPPQ9Y573 584 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 INSL5Q9Y5Q6 135 aa5.58□□□□□ -1.52
SDC2-206ENST00000521590 AKAP9Q99996 3911 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 A0A1B0GTH6 734 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 K7ENP7 123 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 K7EQS6 105 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 GNB5O14775 395 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 FLRT2O43155 660 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 AP5Z1O43299 807 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BNIP3LO60238 219 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 PRAMEF12O95522 483 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BMP4P12644 408 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 ATF2P15336 505 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 AMPD1P23109 780 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 MSX1P28360 303 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 DGKGP49619 791 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BNC1Q01954 994 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 ROR1Q01973 937 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 RNF20Q5VTR2 975 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 TRIM68Q6AZZ1 485 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 SLC8B1Q6J4K2 584 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 INO80CQ6PI98 192 aaPredicted RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 TBC1D10CQ8IV04 446 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 CKAP2LQ8IYA6 745 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 LEMD2Q8NC56 503 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BPIFB1Q8TDL5 484 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BTBD6Q96KE9 485 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 SPACA7Q96KW9 195 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 ZNF512Q96ME7 567 aaPredicted RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 CEP89Q96ST8 783 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 P2RY13Q9BPV8 354 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 EIF2AQ9BY44 585 aaKnown RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 INO80BQ9C086 356 aaPredicted RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 ZDHHC5Q9C0B5 715 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 EBF3Q9H4W6 596 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 SLITRK6Q9H5Y7 841 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 GAREM1Q9H706 876 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 MINDY3Q9H8M7 445 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 HCN2Q9UL51 889 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 ATXN7L1Q9ULK2 861 aaPredicted RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.57□□□□□ -1.52
SDC2-206ENST00000521590 FNDC3AQ9Y2H6 1198 aaKnown RBP5.57□□□□□ -1.52
SDC2-206ENST00000521590 PCDHGB2Q9Y5G2 931 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 BACE2Q9Y5Z0 518 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 SPG11Q96JI7 2443 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 KNL1Q8NG31 2342 aa5.57□□□□□ -1.52
SDC2-206ENST00000521590 SVILO95425 2214 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 NEDD4P46934 1319 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 IGKV6-21A0A0C4DH24 114 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 DDX39AO00148 427 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 PRRG1O14668 218 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 ZNF213O14771 459 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 IPO8O15397 1037 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 CILPO75339 1184 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 EPXP11678 715 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 WEE1P30291 646 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 GJA4P35212 333 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms