RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CRIP3Q6Q6R5 217 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 RHOUQ7L0Q8 258 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 LIX1LQ8IVB5 337 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 OR56A3Q8NH54 315 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 SLC30A5Q8TAD4 765 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
SKP1-208ENST00000521216 NMD3Q96D46 503 aaKnown RBP6.29□□□□□ -1.4
SKP1-208ENST00000521216 TPSD1Q9BZJ3 242 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 PNPLA8Q9NP80 782 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 COL20A1Q9P218 1284 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 HDAC9Q9UKV0 1011 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 SHOC2Q9UQ13 582 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 TBC1D30Q9Y2I9 924 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 HS3ST4Q9Y661 456 aa6.29□□□□□ -1.4
SKP1-208ENST00000521216 F8W8V4 182 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 IFIT2P09913 472 aaKnown RBP6.28□□□□□ -1.4
SKP1-208ENST00000521216 CYP2C9P11712 490 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 TACR2P21452 398 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 CD6P30203 668 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 VIPR2P41587 438 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 PRIM2P49643 509 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 SF3B3Q15393 1217 aaKnown RBP6.28□□□□□ -1.4
SKP1-208ENST00000521216 PLA1AQ53H76 456 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 RBM20Q5T481 1227 aaKnown RBP6.28□□□□□ -1.4
SKP1-208ENST00000521216 DBX2Q6ZNG2 339 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 TSHZ1Q6ZSZ6 1077 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 C11orf96Q7Z7L8 435 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 VRK3Q8IV63 474 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.28□□□□□ -1.4
SKP1-208ENST00000521216 CCDC33Q8N5R6 958 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 TOR1AIP2Q8NFQ8 470 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 NEU4Q8WWR8 484 aaPredicted RBP6.28□□□□□ -1.4
SKP1-208ENST00000521216 TNIP3Q96KP6 325 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 Q96MF0 132 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 CYP4F11Q9HBI6 524 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 CHST12Q9NRB3 414 aa6.28□□□□□ -1.4
SKP1-208ENST00000521216 POM121BA6NF01 834 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 PARP1P09874 1014 aaKnown RBP6.27□□□□□ -1.41
SKP1-208ENST00000521216 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
SKP1-208ENST00000521216 ABHD18Q0P651 414 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 HDAC1Q13547 482 aaPredicted RBP6.27□□□□□ -1.41
SKP1-208ENST00000521216 MGAT5BQ3V5L5 792 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 ARHGAP40Q5TG30 622 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 TMPRSS9Q7Z410 1059 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 ZNF280BQ86YH2 543 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 B3GALNT2Q8NCR0 500 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 SSH3Q8TE77 659 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 SPSB4Q96A44 273 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 STRBPQ96SI9 672 aaKnown RBP6.27□□□□□ -1.41
SKP1-208ENST00000521216 PHTF1Q9UMS5 762 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 DMTF1Q9Y222 760 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 MRPS17Q9Y2R5 130 aaKnown RBP6.27□□□□□ -1.41
SKP1-208ENST00000521216 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.41
SKP1-208ENST00000521216 SPATA31A3Q5VYP0 1347 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 PIPSLA2A3N6 862 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 FZD7O75084 574 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 IL18RAPO95256 599 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 EGR2P11161 476 aaPredicted RBP6.26□□□□□ -1.41
SKP1-208ENST00000521216 PPP3CBP16298 524 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 AK2P54819 239 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 WNT3P56703 355 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 LOXL3P58215 753 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 ZNF543Q08ER8 600 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 SCAPQ12770 1279 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 VPS53Q5VIR6 699 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 ABHD17BQ5VST6 288 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 KLHDC7AQ5VTJ3 777 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 ZDHHC24Q6UX98 284 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 UNC13DQ70J99 1090 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 SLC44A3Q8N4M1 653 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 CAVIN3Q969G5 261 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 AIFM2Q9BRQ8 373 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 UNKQ9C0B0 810 aaKnown RBP6.26□□□□□ -1.41
SKP1-208ENST00000521216 TBC1D23Q9NUY8 699 aa6.26□□□□□ -1.41
SKP1-208ENST00000521216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.26□□□□□ -1.41
SKP1-208ENST00000521216 FOXN3O00409 490 aaPredicted RBP6.25□□□□□ -1.41
SKP1-208ENST00000521216 FSHBP01225 129 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 KLRC1P26715 233 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 STT3AP46977 705 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 ITGA8P53708 1063 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 ZXDAP98168 799 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 DAG1Q14118 895 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 E2F2Q14209 437 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 RGS7BPQ6MZT1 257 aaPredicted RBP6.25□□□□□ -1.41
SKP1-208ENST00000521216 USP51Q70EK9 711 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 LPIN2Q92539 896 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 LARP4BQ92615 738 aaKnown RBP6.25□□□□□ -1.41
SKP1-208ENST00000521216 FAM136AQ96C01 138 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 FBXL20Q96IG2 436 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 SNX22Q96L94 193 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 MYD88Q99836 296 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 MESP1Q9BRJ9 268 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 PTDSS2Q9BVG9 487 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 BRIP1Q9BX63 1249 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 ACTRT3Q9BYD9 372 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 CHST8Q9H2A9 424 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 SERTAD3Q9UJW9 196 aa6.25□□□□□ -1.41
SKP1-208ENST00000521216 MBD3L4A6NDZ8 208 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms