RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 C10orf88Q9H8K7 445 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 CNNM2Q9H8M5 875 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 KANSL3Q9P2N6 904 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 hCG_2039718K7EN88 272 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 TLR2O60603 784 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 DNAJA2O60884 412 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 PAHP00439 452 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 KRT6AP02538 564 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 KRT6BP04259 564 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ICAM2P13598 275 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 TBXAS1P24557 533 aaPredicted RBP13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ANTXR2P58335 489 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 DSC3Q14574 896 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 LSM12Q3MHD2 195 aaKnown RBP13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ROPN1BQ9BZX4 212 aaPredicted RBP13.4□□□□□ -0.26
CPEB4-208ENST00000520867 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
CPEB4-208ENST00000520867 DNAJC18Q9H819 358 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ROPN1Q9HAT0 212 aaPredicted RBP13.4□□□□□ -0.26
CPEB4-208ENST00000520867 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 EBF1Q9UH73 591 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
CPEB4-208ENST00000520867 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 ZW10O43264 779 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 MMP1P03956 469 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 BMXP51813 675 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 SCFD1Q8WVM8 642 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 ANKS1AQ92625 1134 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 INO80BQ9C086 356 aaPredicted RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 BCAP29Q9UHQ4 241 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 NR2E1Q9Y466 385 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PCDHB4Q9Y5E5 795 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 FLT1P17948 1338 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 TSPOAP1O95153 1857 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 A0A087WZG4 1122 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 RPN1P04843 607 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PDE6AP16499 860 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 CTBSQ01459 385 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PTPROQ16827 1216 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 KIAA2013Q8IYS2 634 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PAF1Q8N7H5 531 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PLEKHA5Q9HAU0 1116 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 IL20Q9NYY1 176 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 ANKMY1Q9P2S6 941 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
CPEB4-208ENST00000520867 PTPRMP28827 1452 aa13.39□□□□□ -0.27
CPEB4-208ENST00000520867 CASZ1Q86V15 1759 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GOLGA8QA0A0J9YX86 632 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GOLGA8OA6NCC3 632 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 CAPN8A6NHC0 703 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GOLGA8NF8WBI6 632 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GOLGA8RI6L899 631 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NKRFO15226 690 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPEB4-208ENST00000520867 KLHL41O60662 606 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 RNGTTO60942 597 aaKnown RBP13.38□□□□□ -0.27
CPEB4-208ENST00000520867 CCDC130P13994 396 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ALDH3B2P48448 385 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 TNNI2P48788 182 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ATP6V0D1P61421 351 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 IL9RQ01113 521 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 SHEQ5VZ18 495 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ICA1LQ8NDH6 482 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 FBXO27Q8NI29 283 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NOC4LQ9BVI4 516 aaKnown RBP13.38□□□□□ -0.27
CPEB4-208ENST00000520867 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ARHGEF4Q9NR80 690 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NKIRAS1Q9NYS0 192 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 SNX24Q9Y343 169 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
CPEB4-208ENST00000520867 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 E9PMD0 336 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GPC4O75487 556 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 GMNNO75496 209 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ZNF23P17027 643 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 MUTP22033 750 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ITGADQ13349 1161 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms