RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 TAB2Q9NYJ8 693 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 GCNT4Q9P109 453 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 LIMA1Q9UHB6 759 aaKnown RBP8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 FBXL5Q9UKA1 691 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 L1RE1Q9UN81 338 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 CDY1Q9Y6F8 540 aa8.22□□□□□ -1.09
CSGALNACT1-206ENST00000518542 PLXNA3P51805 1871 aa8.21□□□□□ -1.09
CSGALNACT1-206ENST00000518542 LRRC10BA6NIK2 292 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TBC1D4O60343 1298 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CLASP2O75122 1294 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SERPINC1P01008 464 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ELF1P32519 619 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CLCN4P51793 760 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 COPB1P53618 953 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 HYAL1Q12794 435 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SMARCB1Q12824 385 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LRMPQ12912 555 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 RAB33AQ14088 237 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 HS1BP3Q53T59 392 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MIIPQ5JXC2 388 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TPGS2Q68CL5 300 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SLC8B1Q6J4K2 584 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SCARA5Q6ZMJ2 495 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LIMS2Q7Z4I7 341 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PALB2Q86YC2 1186 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PPM1KQ8N3J5 372 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 EFHBQ8N7U6 833 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ZNF461Q8TAF7 563 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PPM1EQ8WY54 764 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CASP10Q92851 521 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 FAM81BQ96LP2 452 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PPP1R9BQ96SB3 815 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ACBD6Q9BR61 282 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 INTS2Q9H0H0 1204 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 APOBEC3GQ9HC16 384 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 DDX43Q9NXZ2 648 aaKnown RBP8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 THEGQ9P2T0 379 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MAFFQ9ULX9 164 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MYH10P35580 1976 aa8.21□□□□□ -1.1
CSGALNACT1-206ENST00000518542 REV3LO60673 3130 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 A8MXQ7 604 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 GABRDO14764 452 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TGM5O43548 720 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PDGFRBP09619 1106 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 WEE2P0C1S8 567 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ATP1A3P13637 1013 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ATF2P15336 505 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 GTF2F1P35269 517 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ASPAP45381 313 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 RAP1GAPP47736 663 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MFAP3P55082 362 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CDH8P55286 799 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ROR1Q01973 937 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 GCNT1Q02742 428 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 UBXN1Q04323 297 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 GPR17Q13304 367 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ADAM15Q13444 863 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CUL2Q13617 745 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MAPRE1Q15691 268 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 NFE2Q16621 373 aaPredicted RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 INTS6LQ5JSJ4 861 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LIN9Q5TKA1 542 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LLGL2Q6P1M3 1020 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TRIM65Q6PJ69 517 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CCDC149Q6ZUS6 474 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 RTL10Q7L3V2 364 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LMO3Q8TAP4 145 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 C2orf15Q8WU43 125 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SLC22A17Q8WUG5 538 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 HDAC7Q8WUI4 952 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 KBTBD7Q8WVZ9 684 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 WNT2BQ93097 391 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ELMO3Q96BJ8 720 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PABPC5Q96DU9 382 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 FAM122AQ96E09 287 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TNIP3Q96KP6 325 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 MRPL45Q9BRJ2 306 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CRACR2AQ9BSW2 395 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 ZCWPW1Q9H0M4 648 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 HSD3B7Q9H2F3 369 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PLEKHA4Q9H4M7 779 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 SMYD3Q9H7B4 428 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CLDND1Q9NY35 253 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 CDH9Q9ULB4 789 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 BARX2Q9UMQ3 279 aaPredicted RBP8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 HCFC2Q9Y5Z7 792 aa8.2□□□□□ -1.1
CSGALNACT1-206ENST00000518542 WDR27A2RRH5 827 aa8.19□□□□□ -1.1
CSGALNACT1-206ENST00000518542 LGALS16A8MUM7 142 aa8.19□□□□□ -1.1
CSGALNACT1-206ENST00000518542 PRRG1O14668 218 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms