RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 GTPBP10A4D1E9 387 aaKnown RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 BIN1O00499 593 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 PPEF2O14830 753 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 RFPL2O75678 378 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 HLA-DRAP01903 254 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 AFPP02771 609 aaKnown RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 HAPLN1P10915 354 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 WEE1P30291 646 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 GCLMP48507 274 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 EPHA5P54756 1037 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 PFKPQ01813 784 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 TWF1Q12792 350 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 STILQ15468 1287 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 LMBRD2Q68DH5 695 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 RBM43Q6ZSC3 357 aaKnown RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 CRYBG2Q8N1P7 616 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 KIAA1958Q8N8K9 716 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 ZSWIM2Q8NEG5 633 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 EXOC4Q96A65 974 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 ZNF707Q96C28 371 aaPredicted RBP10.51□□□□□ -0.73
NR1I3-220ENST00000505005 SPATA17Q96L03 361 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 NT5C1AQ9BXI3 368 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 XYLT2Q9H1B5 865 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 CTNND2Q9UQB3 1225 aa10.51□□□□□ -0.73
NR1I3-220ENST00000505005 TCF20Q9UGU0 1960 aaKnown RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 SMTNL1A8MU46 457 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 PI4K2BG5E9Z4 385 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 CCL16O15467 120 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 RTN3O95197 1032 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 RHOP08100 348 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 LAMP2P13473 410 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 PTPN1P18031 435 aaKnown RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 FMO5P49326 533 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 TPM4P67936 248 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 STX1AQ16623 288 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 RSPO2Q6UXX9 243 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 GRASPQ7Z6J2 395 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 DNAJB7Q7Z6W7 309 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 FMNL3Q8IVF7 1028 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 C12orf76Q8N812 135 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 B3GALNT2Q8NCR0 500 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 PDZD8Q8NEN9 1154 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 OVCA2Q8WZ82 227 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 TRMT2BQ96GJ1 504 aaKnown RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 C8orf48Q96LL4 319 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 NT5C1BQ96P26 610 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 SEPT5Q99719 369 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 BCO2Q9BYV7 579 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 PNPLA8Q9NP80 782 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 OBP2AQ9NY56 170 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 ABI2Q9NYB9 513 aaPredicted RBP10.5□□□□□ -0.73
NR1I3-220ENST00000505005 GTF3C4Q9UKN8 822 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 YIPF1Q9Y548 306 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 PLXNA3P51805 1871 aa10.5□□□□□ -0.73
NR1I3-220ENST00000505005 ADAM12O43184 909 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 RFX1P22670 979 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 GRIK1P39086 918 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 MTIF2P46199 727 aaKnown RBP10.49□□□□□ -0.73
NR1I3-220ENST00000505005 WNT7BP56706 349 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 DLG4P78352 724 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 AMPD2Q01433 879 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 GCNT1Q02742 428 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 INCA1Q0VD86 236 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 TDGQ13569 410 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 PTPN21Q16825 1174 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 RNF135Q8IUD6 432 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 TRIM59Q8IWR1 403 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 OR10T2Q8NGX3 314 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 DEPDC1BQ8WUY9 529 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 MRPS31Q92665 395 aaKnown RBP10.49□□□□□ -0.73
NR1I3-220ENST00000505005 SLC35C1Q96A29 364 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 SMARCD1Q96GM5 515 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 SHDQ96IW2 340 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 MYRFLQ96LU7 910 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 PRRX2Q99811 253 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 APOL5Q9BWW9 433 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 UBXN6Q9BZV1 441 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 FBXO44Q9H4M3 255 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 KIF9Q9HAQ2 790 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 ZFP14Q9HCL3 533 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 THG1LQ9NWX6 298 aaKnown RBP10.49□□□□□ -0.73
NR1I3-220ENST00000505005 DNMT3BQ9UBC3 853 aaKnown RBP10.49□□□□□ -0.73
NR1I3-220ENST00000505005 PTPRJQ12913 1337 aa10.49□□□□□ -0.73
NR1I3-220ENST00000505005 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 DPYSL4O14531 572 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 ECI2O75521 394 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 SEC24AO95486 1093 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 VNN1O95497 513 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms