RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 GPR17Q13304 367 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 MAPRE1Q15691 268 aaKnown RBP14.86□□□□□ -0.03
DDR1-253ENST00000504651 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 RNF19BQ6ZMZ0 732 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 SLC4A11Q8NBS3 891 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 MYLPFQ96A32 169 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 NUP58Q9BVL2 599 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 STK33Q9BYT3 514 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 GRPEL1Q9HAV7 217 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
DDR1-253ENST00000504651 GTF3C4Q9UKN8 822 aa14.86□□□□□ -0.03
DDR1-253ENST00000504651 MYBPHLA2RUH7 354 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 TGM5O43548 720 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 PAEPP09466 180 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 CD19P15391 556 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 CDR1P51861 262 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 ZNF132P52740 706 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 CYP27A1Q02318 531 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 ADCY1Q08828 1119 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 HYAL1Q12794 435 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 SMARCB1Q12824 385 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 TRIM14Q14142 442 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 NFE2Q16621 373 aaPredicted RBP14.85□□□□□ -0.03
DDR1-253ENST00000504651 FIGNQ5HY92 759 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 TPGS2Q68CL5 300 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 LLGL2Q6P1M3 1020 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 C4orf50Q6ZRC1 276 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 LRRTM3Q86VH5 581 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 SPATA2LQ8IUW3 424 aaPredicted RBP14.85□□□□□ -0.03
DDR1-253ENST00000504651 VSTM4Q8IW00 320 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 CRYBG2Q8N1P7 616 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 ZNF461Q8TAF7 563 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 MYCBPAPQ8TBZ2 947 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 SPPL2BQ8TCT7 592 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 IQCDQ96DY2 449 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 MRFAP1L1Q96HT8 127 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
DDR1-253ENST00000504651 PKMYT1Q99640 499 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 LPIN3Q9BQK8 851 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 MED10Q9BTT4 135 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 TTYH3Q9C0H2 523 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 IGFLR1Q9H665 355 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 TMLHEQ9NVH6 421 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 MTMR10Q9NXD2 777 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
DDR1-253ENST00000504651 FBXW11Q9UKB1 542 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 CNTN6Q9UQ52 1028 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 PCDHB5Q9Y5E4 795 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDR1-253ENST00000504651 HCFC2Q9Y5Z7 792 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 MTCL1Q9Y4B5 1905 aaKnown RBP14.85□□□□□ -0.03
DDR1-253ENST00000504651 ATP8B3O60423 1300 aa14.85□□□□□ -0.03
DDR1-253ENST00000504651 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 RNF225M0QZC1 329 aaPredicted RBP14.84□□□□□ -0.03
DDR1-253ENST00000504651 FOXN3O00409 490 aaPredicted RBP14.84□□□□□ -0.03
DDR1-253ENST00000504651 SRGAP2BP0DMP2 458 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 CCDC130P13994 396 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 ELF1P32519 619 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■■■■□ 24.7
DDR1-253ENST00000504651 STAT1P42224 750 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 JAM2P57087 298 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 SGO2Q562F6 1265 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 LIN9Q5TKA1 542 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 SMYD5Q6GMV2 418 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 FAM171BQ6P995 826 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 ELMSAN1Q6PJG2 1045 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 TMC6Q7Z403 805 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 FAM35AQ86V20 835 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 C12orf29Q8N999 325 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 C2orf15Q8WU43 125 aaKnown RBP14.84□□□□□ -0.03
DDR1-253ENST00000504651 SLC22A17Q8WUG5 538 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 PCED1BQ96HM7 432 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 MAN1C1Q9NR34 630 aa14.84□□□□□ -0.03
DDR1-253ENST00000504651 PATJQ8NI35 1801 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 LRRC53A6NM62 1247 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 PRRG1O14668 218 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 CYP26A1O43174 497 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 GFPT2O94808 682 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 ABLIM3O94929 683 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 GYPCP04921 128 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 TPM1P09493 284 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 SPATA31D3P0C874 917 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 VDRP11473 427 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 ATF2P15336 505 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 EPCAMP16422 314 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 BRD2P25440 801 aaKnown RBP14.83□□□□□ -0.04
DDR1-253ENST00000504651 ADORA2BP29275 332 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 GNA15P30679 374 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 SOX5P35711 763 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 MGAT5BQ3V5L5 792 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 SPATA31D4Q6ZUB0 917 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 GPIHBP1Q8IV16 184 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 FAM71AQ8IYT1 594 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 EFHBQ8N7U6 833 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 ATAD1Q8NBU5 361 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 KREMEN2Q8NCW0 462 aa14.83□□□□□ -0.04
DDR1-253ENST00000504651 SLC2A14Q8TDB8 520 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms