RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 FAM228AQ86W67 206 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 CCNJLQ8IV13 435 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 IL31RAQ8NI17 732 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 CTCFLQ8NI51 663 aaPredicted RBP5.62□□□□□ -1.51
OTUD4-204ENST00000504331 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 DNASE1L2Q92874 299 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 ALKBH8Q96BT7 664 aaKnown RBP5.62□□□□□ -1.51
OTUD4-204ENST00000504331 MYADMQ96S97 322 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 MXRA8Q9BRK3 442 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 GCOM2Q9BZD3 368 aaPredicted RBP5.62□□□□□ -1.51
OTUD4-204ENST00000504331 RXFP1Q9HBX9 757 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 KCNH7Q9NS40 1196 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 ANKFY1Q9P2R3 1169 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 FOXD3Q9UJU5 478 aaPredicted RBP5.62□□□□□ -1.51
OTUD4-204ENST00000504331 KCNH3Q9ULD8 1083 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 SUPT16HQ9Y5B9 1047 aaKnown RBP5.62□□□□□ -1.51
OTUD4-204ENST00000504331 MIA3Q5JRA6 1907 aa5.62□□□□□ -1.51
OTUD4-204ENST00000504331 INPPL1O15357 1258 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 MGEA5O60502 916 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 DKC1O60832 514 aaKnown RBP eCLIP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ATP9AO75110 1047 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 DDAH1O94760 285 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CSPG5O95196 566 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PAPSS2O95340 614 aaPredicted RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 KRT18P05783 430 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 DCNP07585 359 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 FGFR1P11362 822 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 TGM1P22735 817 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 SP100P23497 879 aaPredicted RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ATRXP46100 2492 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CLCN7P51798 805 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 SP4Q02446 784 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ID3Q02535 119 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CSTF1Q05048 431 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 APOBRQ0VD83 1088 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 TROAPQ12815 778 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 AP3B2Q13367 1082 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 HLTFQ14527 1009 aaKnown RBP eCLIP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 BRD3Q15059 726 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 SEC23AQ15436 765 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CEP55Q53EZ4 464 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 NOMO2Q5JPE7 1267 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 RALGAPA1Q6GYQ0 2036 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ABHD15Q6UXT9 468 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 HOMER1Q86YM7 354 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 HACE1Q8IYU2 909 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 SYNPOQ8N3V7 929 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 DCLK2Q8N568 766 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 E2F7Q96AV8 911 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PIGSQ96S52 555 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 TCF12Q99081 682 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 APOL5Q9BWW9 433 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 NT5C3AQ9H0P0 336 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 XYLT2Q9H1B5 865 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CCDC86Q9H6F5 360 aaKnown RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 LTB4R2Q9NPC1 389 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ZNF302Q9NR11 478 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PRMT8Q9NR22 394 aaPredicted RBP5.61□□□□□ -1.51
OTUD4-204ENST00000504331 RXFP3Q9NSD7 469 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 GDE1Q9NZC3 331 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 ZMYM2Q9UBW7 1377 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CDH7Q9ULB5 785 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 CA14Q9ULX7 337 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 GINS2Q9Y248 185 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PCDHGB7Q9Y5F8 929 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PCDHGA5Q9Y5G8 931 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PCDHA10Q9Y5I2 948 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 BAHCC1Q9P281 2608 aa5.61□□□□□ -1.51
OTUD4-204ENST00000504331 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 CCDC189A1A4V9 331 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 B4E1Z4 1266 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 MEIS1O00470 390 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 IFIT3O14879 490 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 ASAP2O43150 1006 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 SUV39H1O43463 412 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 PPP1R11O60927 126 aaPredicted RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 RNGTTO60942 597 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 ZC3H11AO75152 810 aaKnown RBP eCLIP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 ECI2O75521 394 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 AKAP3O75969 853 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 CELA3BP08861 270 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 CNPP09543 421 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 DARSP14868 501 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 EPCAMP16422 314 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 AXLP30530 894 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 SFNP31947 248 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 GATMP50440 423 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 METAP2P50579 478 aaKnown RBP eCLIP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 PDE1AP54750 535 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 NLRP11P59045 1033 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 HAND2P61296 217 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 RACK1P63244 317 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 DSG1Q02413 1049 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 TMEM62Q0P6H9 643 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 ELAVL2Q12926 359 aaKnown RBP5.6□□□□□ -1.51
OTUD4-204ENST00000504331 HTR4Q13639 388 aa5.6□□□□□ -1.51
OTUD4-204ENST00000504331 COL9A2Q14055 689 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms