RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 ACTRT3Q9BYD9 372 aa3.17□□□□□ -1.9
RBM39-242ENST00000498280 SERTAD4Q9NUC0 356 aa3.17□□□□□ -1.9
RBM39-242ENST00000498280 NEU2Q9Y3R4 380 aa3.17□□□□□ -1.9
RBM39-242ENST00000498280 EID1Q9Y6B2 187 aa3.17□□□□□ -1.9
RBM39-242ENST00000498280 F2RL2O00254 374 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 PPM1DO15297 605 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 AKAP10O43572 662 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 TOP3BO95985 862 aaKnown RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 CCND1P24385 295 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 EPHB1P54762 984 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 PIN1Q13526 163 aaPredicted RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 LAMB3Q13751 1172 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 SLC44A4Q53GD3 710 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 RBM20Q5T481 1227 aaKnown RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 PRAMEF17Q5VTA0 474 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 AWAT2Q6E213 333 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 SMRP1Q8NCR6 262 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 SMOQ99835 787 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 RTFDC1Q9BY42 306 aaPredicted RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 SLC13A1Q9BZW2 595 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 VPS33BQ9H267 617 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 ZIM2Q9NZV7 527 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 IP6K2Q9UHH9 426 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 LUC7L2Q9Y383 392 aaKnown RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 SPEF1Q9Y4P9 236 aa3.16□□□□□ -1.9
RBM39-242ENST00000498280 FNDC1Q4ZHG4 1894 aaPredicted RBP3.16□□□□□ -1.9
RBM39-242ENST00000498280 KLHL33A6NCF5 533 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 ZNF785A8K8V0 405 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 NT5C1B-RDH14C9J2C7 533 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 E7ENX8 843 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 PPP6CO00743 305 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 PPEF2O14830 753 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 MARCH6O60337 910 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 SNUPNO95149 360 aaKnown RBP3.15□□□□□ -1.91
RBM39-242ENST00000498280 KIF20AO95235 890 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 SCGB1D2O95969 90 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 LIPAP38571 399 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 DSC2Q02487 901 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 TAP2Q03519 686 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 PIGFQ07326 219 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 SNAPC2Q13487 334 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 NFE2Q16621 373 aaPredicted RBP3.15□□□□□ -1.91
RBM39-242ENST00000498280 ATP2B3Q16720 1220 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 KHDC1Q4VXA5 237 aaKnown RBP3.15□□□□□ -1.91
RBM39-242ENST00000498280 CCDC93Q567U6 631 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 MAVSQ7Z434 540 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 FMNL3Q8IVF7 1028 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 SAMD14Q8IZD0 417 aaPredicted RBP3.15□□□□□ -1.91
RBM39-242ENST00000498280 PSD4Q8NDX1 1056 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 KLHDC4Q8TBB5 520 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 TSR2Q969E8 191 aaKnown RBP3.15□□□□□ -1.91
RBM39-242ENST00000498280 HMCESQ96FZ2 354 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 TEKT5Q96M29 485 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 C1orf43Q9BWL3 253 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 RHOBTB2Q9BYZ6 727 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 ARHGEF3Q9NR81 526 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 ELOVL5Q9NYP7 299 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 EHD3Q9NZN3 535 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 CHPF2Q9P2E5 772 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 TCEAL9Q9UHQ7 104 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 MRFAP1Q9Y605 127 aa3.15□□□□□ -1.91
RBM39-242ENST00000498280 SMIM35A0A1B0GVV1 85 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 KCNU1A8MYU2 1149 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 PRRT4C9JH25 899 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 H0YIZ8 118 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 TSPAN6O43657 245 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ABLIM3O94929 683 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ZRANB2O95218 330 aaKnown RBP eCLIP3.14□□□□□ -1.91
RBM39-242ENST00000498280 FAM163BP0C2L3 166 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 MALP21145 153 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ARHGAP25P42331 645 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 MMP13P45452 471 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 RECQLP46063 649 aaPredicted RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 CLCN2P51788 898 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ZNF135P52742 658 aaPredicted RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 KRT85P78386 507 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 HABP2Q14520 560 aaPredicted RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 PPP2R5AQ15172 486 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ZNF260Q3ZCT1 412 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 MIDNQ504T8 468 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 EFCAB2Q5VUJ9 269 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 GADL1Q6ZQY3 521 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 MIGA2Q7L4E1 593 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 FAM109AQ8N4B1 249 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 CPA6Q8N4T0 437 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.14□□□□□ -1.91
RBM39-242ENST00000498280 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.14□□□□□ -1.91
RBM39-242ENST00000498280 ADAMTS15Q8TE58 950 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 JPH3Q8WXH2 748 aaPredicted RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 HDAC10Q969S8 669 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 CDH19Q9H159 772 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 SLAMF7Q9NQ25 335 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 PDGFCQ9NRA1 345 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 MTMR4Q9NYA4 1195 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 DLL3Q9NYJ7 618 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 ZNF180Q9UJW8 692 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 NOB1Q9ULX3 412 aaKnown RBP3.14□□□□□ -1.91
RBM39-242ENST00000498280 LRP12Q9Y561 859 aa3.14□□□□□ -1.91
RBM39-242ENST00000498280 SPATA31A3Q5VYP0 1347 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms