RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-215ENST00000497139 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-215ENST00000497139 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 WDR91A4D1P6 747 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 TBX3O15119 743 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 HOXD12P35452 270 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 ETV4P43268 484 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 BFSP1Q12934 665 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 PDIA2Q13087 525 aaKnown RBP13.62□□□□□ -0.23
VEGFA-215ENST00000497139 APOFQ13790 326 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 METTL25Q8N6Q8 603 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 CCDC106Q9BWC9 280 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 INIPQ9NRY2 104 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 ARMCX1Q9P291 453 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 SEL1LQ9UBV2 794 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 PSTPIP1O43586 416 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 AOC1P19801 751 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 PEX2P28328 305 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 BTKQ06187 659 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 MYLK3Q32MK0 819 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 ZNF410Q86VK4 478 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 CATSPER3Q86XQ3 398 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 APOPT1Q96IL0 206 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 BTBD6Q96KE9 485 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 AVENQ9NQS1 362 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 ADAMTS6Q9UKP5 1117 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 FAF1Q9UNN5 650 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 I3L4J1 428 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 TXNDC9O14530 226 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 SERPINA6P08185 405 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 MAPK4P31152 587 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 SLC5A2P31639 672 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 CPOXP36551 454 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 CPA2P48052 419 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 HSPA13P48723 471 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 NCKAP1LP55160 1127 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 FBXL19Q6PCT2 694 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 GSTA5Q7RTV2 222 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 ATP11CQ8NB49 1132 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 RAB3IL1Q8TBN0 382 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 COA7Q96BR5 231 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 C6orf203Q9P0P8 240 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 HBS1LQ9Y450 684 aaKnown RBP13.61□□□□□ -0.23
VEGFA-215ENST00000497139 DTNAQ9Y4J8 743 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 MAD1L1Q9Y6D9 718 aa13.61□□□□□ -0.23
VEGFA-215ENST00000497139 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PMM2O15305 246 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 LPXNO60711 386 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ZBED1O96006 694 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 COG7P83436 770 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 TRIP10Q15642 601 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 LPCAT4Q643R3 524 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 CPNE8Q86YQ8 564 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 OGFOD1Q8N543 542 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 CLPTM1LQ96KA5 538 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PFDN4Q9NQP4 134 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 SLC17A7Q9P2U7 560 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 EXOC7Q9UPT5 735 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 FADS3Q9Y5Q0 445 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 HTR3EA5X5Y0 456 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 FAM155BO75949 473 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 SLC18A2Q05940 514 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 ZNF746Q6NUN9 644 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
VEGFA-215ENST00000497139 FBXO27Q8NI29 283 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 PYDC1Q8WXC3 89 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 TRIM11Q96F44 468 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 TRPV5Q9NQA5 729 aa13.6□□□□□ -0.23
VEGFA-215ENST00000497139 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
VEGFA-215ENST00000497139 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 SERPINB7O75635 380 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 CDH2P19022 906 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-215ENST00000497139 FMO1Q01740 532 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 TLR1Q15399 786 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 ACAD10Q6JQN1 1059 aa13.59□□□□□ -0.23
VEGFA-215ENST00000497139 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms