RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ACOT1Q86TX2 421 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 LRRC15Q8TF66 581 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 SELENOOQ9BVL4 669 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PRDM12Q9H4Q4 367 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 COG5Q9UP83 839 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 SCINQ9Y6U3 715 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 GOLGA6L9A6NEM1 432 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PTPN2P17706 415 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 KPNA1P52294 538 aaPredicted RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 BST2Q10589 180 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC85BQ15834 202 aaPredicted RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 DDX42Q86XP3 938 aaKnown RBP eCLIP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 FBXO32Q969P5 355 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 CEP295NLQ96MC4 621 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ALS2CR12Q96Q35 445 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 SFXN1Q9H9B4 322 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ABCB6Q9NP58 842 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 MRPS23Q9Y3D9 190 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 I3L4J1 428 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PTGESO14684 152 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 RNF8O76064 485 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 DDHD2O94830 711 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 NRIP1P48552 1158 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 DSG1Q02413 1049 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 ARL13BQ3SXY8 428 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 XKR4Q5GH76 650 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 EFHC1Q5JVL4 640 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC181Q5TID7 509 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 TAF3Q5VWG9 929 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 LLGL2Q6P1M3 1020 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 B3GALNT2Q8NCR0 500 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 CALR3Q96L12 384 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 C17orf80Q9BSJ5 609 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 OLA1Q9NTK5 396 aaKnown RBP9.14□□□□□ -0.95
U2AF1-212ENST00000496462 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 MTMR10Q9NXD2 777 aa9.14□□□□□ -0.95
U2AF1-212ENST00000496462 A0A1B0GTH6 734 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MYL4P12829 197 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 YWHAQP27348 245 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 TKTP29401 623 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 AVPR1AP37288 418 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 TAP1Q03518 808 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 GOLGA7BQ2TAP0 167 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 GPR153Q6NV75 609 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 PPP1R9BQ96SB3 815 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 TSGA10Q9BZW7 698 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 TLR8Q9NR97 1041 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 FAM49BQ9NUQ9 324 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 DNAJB4Q9UDY4 337 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 FRMPD3Q5JV73 1810 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MYO7AQ13402 2215 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 C1RP00736 705 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MYBL1P10243 752 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 PON1P27169 355 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 CDK17Q00537 523 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 KIF5AQ12840 1032 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 GPR17Q13304 367 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 DNAJC24Q6P3W2 148 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 ZNF461Q8TAF7 563 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 LINC01599Q8WXQ3 324 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 CLP1Q92989 425 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 KRT82Q9NSB4 513 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 RNF19AQ9NV58 838 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MTRRQ9UBK8 725 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 FBXL5Q9UKA1 691 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 COQ4Q9Y3A0 265 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 LSM8O95777 96 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 APOEP02649 317 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 C8AP07357 584 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 H2AFZP0C0S5 128 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 TNNT3P45378 269 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 IQCB1Q15051 598 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 HADHQ16836 314 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 FIGNQ5HY92 759 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 CRELD2Q6UXH1 353 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 H2AFVQ71UI9 128 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 DHX40Q8IX18 779 aaKnown RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 PDCL2Q8N4E4 241 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC26Q8TAB7 109 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MYCBPAPQ8TBZ2 947 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 CDX2Q99626 313 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-212ENST00000496462 MIOSQ9NXC5 875 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 NR2E1Q9Y466 385 aa9.13□□□□□ -0.95
U2AF1-212ENST00000496462 ITIH6Q6UXX5 1313 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SLC9A3R1O14745 358 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 CYBBP04839 570 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SLC9A1P19634 815 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 ITIH3Q06033 890 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 PREPLQ4J6C6 727 aaPredicted RBP9.12□□□□□ -0.95
U2AF1-212ENST00000496462 CCDC122Q5T0U0 273 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 DENND5BQ6ZUT9 1274 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 OTOP3Q7RTS5 596 aa9.12□□□□□ -0.95
U2AF1-212ENST00000496462 SP7Q8TDD2 431 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms