RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 PPEF2O14830 753 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 TM4SF5O14894 197 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 GIPC1O14908 333 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 TOP3BO95985 862 aaKnown RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 OR52Z1P0C646 297 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 CCDC192P0DO97 292 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 CXCL8P10145 99 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 KCNE1P15382 129 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 SPINK2P20155 84 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 U2AF2P26368 475 aaKnown RBP eCLIP7.55□□□□□ -1.26e-8■■■■□ 22.6
CHCHD3-206ENST00000496427 GABRR2P28476 465 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 CNR2P34972 360 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 NPTX2P47972 431 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 EFNA5P52803 228 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 MARSP56192 900 aaKnown RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 DUSP4Q13115 394 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 CCINQ13939 588 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 COL9A2Q14055 689 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 GPR158Q5T848 1215 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 STPG1Q5TH74 334 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 NAIF1Q69YI7 327 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 PSAPL1Q6NUJ1 521 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 MPZL3Q6UWV2 235 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 GAREM2Q75VX8 874 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 STKLD1Q8NE28 680 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 GAB3Q8WWW8 586 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 KIFAP3Q92845 792 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 GTF3C6Q969F1 213 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 ACAP3Q96P50 834 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 HHIPQ96QV1 700 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 TCHPQ9BT92 498 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 MRPL4Q9BYD3 311 aaKnown RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 ATXN3LQ9H3M9 355 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 C8orf33Q9H7E9 229 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 DDX19AQ9NUU7 478 aaKnown RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 SLC38A7Q9NVC3 462 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 KIAA1024Q9UPX6 916 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 MYH10P35580 1976 aa7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
CHCHD3-206ENST00000496427 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 PP2D1A8MPX8 630 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 DCLK1O15075 740 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SLC16A4O15374 487 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SPINT1O43278 529 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 HIP1RO75146 1068 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 RPP40O75818 363 aaKnown RBP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 KCNK5O95279 499 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 ZNF806P0C7X5 589 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 MCF2P10911 925 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 PROZP22891 400 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 MARCKSP29966 332 aaPredicted RBP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 MPLP40238 635 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 TNFSF9P41273 254 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 LIMK1P53667 647 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 YWHAHQ04917 246 aaPredicted RBP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 MAPK7Q13164 816 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 PLD1Q13393 1074 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 NOLC1Q14978 699 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SLC10A6Q3KNW5 377 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 DGKKQ5KSL6 1271 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 HAUS3Q68CZ6 603 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 TRIM68Q6AZZ1 485 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 FSTL4Q6MZW2 842 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 Q6ZVU0 165 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SV2AQ7L0J3 742 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 KCNK18Q7Z418 384 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 RALGPS2Q86X27 583 aaPredicted RBP7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 ATAD1Q8NBU5 361 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 LEMD2Q8NC56 503 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 APPL2Q8NEU8 664 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 BEST2Q8NFU1 509 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 ERMNQ8TAM6 284 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 RIN3Q8TB24 985 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 CHFRQ96EP1 664 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 MSANTD3Q96H12 275 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 EDEM2Q9BV94 578 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 HAPLN2Q9GZV7 340 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 KMT5AQ9NQR1 393 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
CHCHD3-206ENST00000496427 OTOL1A6NHN0 477 aaPredicted RBP7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 M0QZQ0 153 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 EGFP01133 1207 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 PROS1P07225 676 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 ATF6P18850 670 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 MATR3P43243 847 aaKnown RBP eCLIP7.53□□□□□ -1.28e-7■■■■□ 20.4
CHCHD3-206ENST00000496427 RAP1GAPP47736 663 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 ALDH1A3P47895 512 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 EPHB3P54753 998 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 SHC2P98077 582 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms