RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PAX3P23760 479 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 MPLP40238 635 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 TAF6P49848 677 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 GTF2BQ00403 316 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 GRIN1Q05586 938 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 PTPAQ15257 358 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 CCDC142Q17RM4 750 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 PLK5Q496M5 336 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 ADALQ6DHV7 355 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 CRELD2Q6UXH1 353 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-204ENST00000493161 THEM5Q8N1Q8 247 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 ZSWIM2Q8NEG5 633 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 SPPL2BQ8TCT7 592 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
SAMM50-204ENST00000493161 ZC3H10Q96K80 434 aaKnown RBP14.78□□□□□ -0.04
SAMM50-204ENST00000493161 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 SLC22A12Q96S37 553 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 DUSP15Q9H1R2 295 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-204ENST00000493161 ASB7Q9H672 318 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 MAGED2Q9UNF1 606 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-204ENST00000493161 C2CD2Q9Y426 696 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 DENND4CQ5VZ89 1909 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 OBSL1O75147 1896 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 ANTXRLA6NF34 631 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 KPNA7A9QM74 516 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 ATG13O75143 517 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 KCNK5O95279 499 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 PLCG1P19174 1290 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 BFSP1Q12934 665 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 KARSQ15046 597 aaKnown RBP14.77□□□□□ -0.05
SAMM50-204ENST00000493161 DDR2Q16832 855 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 ARL6IP4Q66PJ3 421 aaKnown RBP14.77□□□□□ -0.05
SAMM50-204ENST00000493161 MON1AQ86VX9 555 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 TTC16Q8NEE8 873 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 RPLP0P6Q8NHW5 317 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 CYP2S1Q96SQ9 504 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 P2RY13Q9BPV8 354 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 LSM14BQ9BX40 385 aaKnown RBP14.77□□□□□ -0.05
SAMM50-204ENST00000493161 CCSER1Q9C0I3 900 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 INVSQ9Y283 1065 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 PCDHB5Q9Y5E4 795 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 STYXL1Q9Y6J8 313 aa14.77□□□□□ -0.05
SAMM50-204ENST00000493161 GIPC1O14908 333 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 HCRTO43612 131 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 KRT18P05783 430 aaKnown RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 ACAT1P24752 427 aaKnown RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 CYP2F1P24903 491 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 ADSSP30520 456 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 GJA4P35212 333 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 SHC2P98077 582 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 SMARCB1Q12824 385 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 CC2D1AQ6P1N0 951 aaPredicted RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 DCP1BQ8IZD4 617 aaKnown RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 CAMKK1Q8N5S9 505 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 RAD54LQ92698 747 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 AGO2Q9UKV8 859 aaKnown RBP14.76□□□□□ -0.05
SAMM50-204ENST00000493161 PCDHGA5Q9Y5G8 931 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 WNT6Q9Y6F9 365 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 CHD6Q8TD26 2715 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 TCHHQ07283 1943 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 SPAG17Q6Q759 2223 aa14.76□□□□□ -0.05
SAMM50-204ENST00000493161 CNOT1A5YKK6 2376 aaKnown RBP14.75□□□□□ -0.05
SAMM50-204ENST00000493161 TULP1O00294 542 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-204ENST00000493161 AKAP3O75969 853 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 DRD1P21728 446 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 DDX6P26196 483 aaKnown RBP eCLIP14.75□□□□□ -0.05
SAMM50-204ENST00000493161 UBA7P41226 1012 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 KCNA1Q09470 495 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 RNF43Q68DV7 783 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 PSAPL1Q6NUJ1 521 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 PDCL2Q8N4E4 241 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 MRPS31Q92665 395 aaKnown RBP14.75□□□□□ -0.05
SAMM50-204ENST00000493161 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 AK8Q96MA6 479 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 ECT2Q9H8V3 914 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 KIF9Q9HAQ2 790 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 TRPC7Q9HCX4 862 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 VPS45Q9NRW7 570 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 L1RE1Q9UN81 338 aa14.75□□□□□ -0.05
SAMM50-204ENST00000493161 TBCAO75347 108 aaKnown RBP14.74□□□□□ -0.05
SAMM50-204ENST00000493161 SCP2P22307 547 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 POLR2BP30876 1174 aaKnown RBP14.74□□□□□ -0.05
SAMM50-204ENST00000493161 CREB5Q02930 508 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 DMC1Q14565 340 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 ZNF268Q14587 947 aaPredicted RBP14.74□□□□□ -0.05
SAMM50-204ENST00000493161 MTF1Q14872 753 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 PDGFRLQ15198 375 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 ZNF77Q15935 545 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 SV2CQ496J9 727 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 SYT13Q7L8C5 426 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 OSTM1Q86WC4 334 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 SFR1Q86XK3 245 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 PKMYT1Q99640 499 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 EDEM2Q9BV94 578 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 LINC00597Q9H2U6 94 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 DUS2Q9NX74 493 aaKnown RBP14.74□□□□□ -0.05
SAMM50-204ENST00000493161 ZMYM5Q9UJ78 669 aa14.74□□□□□ -0.05
SAMM50-204ENST00000493161 ZNF638Q14966 1978 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms