RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ZNF558Q96NG5 402 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 NUP88Q99567 741 aaPredicted RBP4.68□□□□□ -1.66
UBR4-215ENST00000492606 SEMA3CQ99985 751 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 SSBP4Q9BWG4 385 aaPredicted RBP4.68□□□□□ -1.66
UBR4-215ENST00000492606 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBR4-215ENST00000492606 PRDM16Q9HAZ2 1276 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 IFT57Q9NWB7 429 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 ZNF451Q9Y4E5 1061 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 PIAS3Q9Y6X2 628 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 VWA8A3KMH1 1905 aa4.68□□□□□ -1.66
UBR4-215ENST00000492606 COL1A2P08123 1366 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CHL1O00533 1208 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CLEC3AO75596 197 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CFIP05156 583 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 ITGAVP06756 1048 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CNPP09543 421 aaKnown RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 SPATA31C1P0DKV0 1188 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CTSAP10619 480 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 RPL17P18621 184 aaKnown RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 KLRC2P26717 231 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 GRIA2P42262 883 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 MASP1P48740 699 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 ZNF143P52747 638 aaPredicted RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 LRRC32Q14392 662 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 PUM3Q15397 648 aaKnown RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 ZXDCQ2QGD7 858 aaPredicted RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 TBC1D25Q3MII6 688 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 FDX2Q6P4F2 183 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CHST3Q7LGC8 479 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CDH24Q86UP0 819 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 TMEM173Q86WV6 379 aaPredicted RBP4.67□□□□□ -1.66
UBR4-215ENST00000492606 SHISA5Q8N114 240 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 ZNF248Q8NDW4 579 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 PHKBQ93100 1093 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 MIB2Q96AX9 1013 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 MRGPRX3Q96LB0 322 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 KREMEN1Q96MU8 473 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 SLF1Q9BQI6 1058 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 ACAD9Q9H845 621 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 AATFQ9NY61 560 aaKnown RBP eCLIP4.67□□□□□ -1.66
UBR4-215ENST00000492606 SERPINB13Q9UIV8 391 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 KNSTRNQ9Y448 316 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 WNT6Q9Y6F9 365 aa4.67□□□□□ -1.66
UBR4-215ENST00000492606 C17orf102A2RUQ5 167 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 ANKRD34BA5PLL1 514 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 TMEM200CA6NKL6 621 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SPDYE3A6NKU9 549 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 MPHOSPH10O00566 681 aaKnown RBP4.66□□□□□ -1.66
UBR4-215ENST00000492606 KLK10O43240 276 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 ASMTLO95671 621 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SPATA31D3P0C874 917 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 FGFR1P11362 822 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 CD247P20963 164 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 L1CAMP32004 1257 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 ACTN2P35609 894 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 PPM1AP35813 382 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 PTGER3P43115 390 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 ALDH5A1P51649 535 aaPredicted RBP4.66□□□□□ -1.66
UBR4-215ENST00000492606 AMPD3Q01432 767 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SLC14A1Q13336 389 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 DGKDQ16760 1214 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 BBS9Q3SYG4 887 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 CCDC157Q569K6 752 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 PRRT3Q5FWE3 981 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 FAM209AQ5JX71 171 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 FHL5Q5TD97 284 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 TANGO2Q6ICL3 276 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 LETMD1Q6P1Q0 360 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 CCDC62Q6P9F0 684 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SPATA31D4Q6ZUB0 917 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SYT12Q8IV01 421 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 ITFG1Q8TB96 612 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SCFD2Q8WU76 684 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 EXTL1Q92935 676 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 LURAP1Q96LR2 239 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 VN1R3Q9BXE9 311 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 AMNQ9BXJ7 453 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 BRINP2Q9C0B6 783 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 NT5C3AQ9H0P0 336 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 TMX1Q9H3N1 280 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 RNPEPQ9H4A4 650 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 PIDD1Q9HB75 910 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 SLC38A10Q9HBR0 1119 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 RNF146Q9NTX7 359 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 CYP39A1Q9NYL5 469 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 NOP53Q9NZM5 478 aaKnown RBP4.66□□□□□ -1.66
UBR4-215ENST00000492606 PCDHB7Q9Y5E2 793 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 MGAM2Q2M2H8 2515 aa4.66□□□□□ -1.66
UBR4-215ENST00000492606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.65□□□□□ -1.664e-8■□□□□ 10
UBR4-215ENST00000492606 ARHGAP10A1A4S6 786 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 B4E1Z4 1266 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 C9orf172C9J069 976 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 MGEA5O60502 916 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 ZBED4O75132 1171 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 ECI2O75521 394 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 LEFTY1O75610 366 aa4.65□□□□□ -1.67
UBR4-215ENST00000492606 LDHCP07864 332 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms