RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 PCDHB5Q9Y5E4 795 aa11.6□□□□□ -0.55
VPS13D-210ENST00000489961 CCDC195A0A1B0GUA6 201 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 MYBPHLA2RUH7 354 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 LRRC10BA6NIK2 292 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 LGALS16A8MUM7 142 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ATP2C2O75185 946 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 XYLBO75191 536 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 CILPO75339 1184 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 RFPL2O75678 378 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 SEC24AO95486 1093 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 LRG1P02750 347 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 SLC9A1P19634 815 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PON1P27169 355 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 TUFMP49411 452 aaKnown RBP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 MFAP3P55082 362 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 GCNT1Q02742 428 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 DUSP4Q13115 394 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PLD1Q13393 1074 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 MGAT5BQ3V5L5 792 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 FILIP1LQ4L180 1135 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 MDH1BQ5I0G3 518 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 FAM171BQ6P995 826 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ENOSF1Q7L5Y1 443 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ACOT1Q86TX2 421 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 SPATA2LQ8IUW3 424 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 C12orf76Q8N812 135 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ATAD1Q8NBU5 361 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 B3GALNT2Q8NCR0 500 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 CMASQ8NFW8 434 aaPredicted RBP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 MYCBPAPQ8TBZ2 947 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 FUBP3Q96I24 572 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PKMYT1Q99640 499 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ARID3AQ99856 593 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 APOL5Q9BWW9 433 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ADAM7Q9H2U9 754 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 DPEP3Q9H4B8 488 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 PIDD1Q9HB75 910 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 CRTAC1Q9NQ79 661 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 TMLHEQ9NVH6 421 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 FAM50BQ9Y247 325 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 NME7Q9Y5B8 376 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 INSL5Q9Y5Q6 135 aa11.59□□□□□ -0.55
VPS13D-210ENST00000489961 VNN2O95498 520 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 SERPINC1P01008 464 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ALDH1A3P47895 512 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 CYP27A1Q02318 531 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 TFF2Q03403 129 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 SMAD4Q13485 552 aaKnown RBP11.58□□□□□ -0.56
VPS13D-210ENST00000489961 CFAP221Q4G0U5 840 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ATAT1Q5SQI0 421 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 PHLDB3Q6NSJ2 640 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 TMC5Q6UXY8 1006 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 RRAGAQ7L523 313 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 CRYBG2Q8N1P7 616 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ELMOD1Q8N336 334 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
VPS13D-210ENST00000489961 SMG7Q92540 1137 aaKnown RBP11.58□□□□□ -0.56
VPS13D-210ENST00000489961 MYLPFQ96A32 169 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 JAKMIP2Q96AA8 810 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 PCED1BQ96HM7 432 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 TMEM176AQ96HP8 235 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 SEPT5Q99719 369 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 RHOBTB2Q9BYZ6 727 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 S1PR5Q9H228 398 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-210ENST00000489961 HMGXB4Q9UGU5 601 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 YIPF1Q9Y548 306 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 ATP8B3O60423 1300 aa11.58□□□□□ -0.56
VPS13D-210ENST00000489961 PTPRDP23468 1912 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 CCL16O15467 120 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 MBTPS2O43462 519 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 PAPLNO95428 1278 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 POU2F2P09086 479 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 HAPLN1P10915 354 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-210ENST00000489961 MTHFRP42898 656 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 MAGEA11P43364 429 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 CDR1P51861 262 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 EPHB3P54753 998 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 RPL10AP62906 217 aaKnown RBP11.57□□□□□ -0.56
VPS13D-210ENST00000489961 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
VPS13D-210ENST00000489961 UBXN1Q04323 297 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 KCNMA1Q12791 1236 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 TWF1Q12792 350 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 ORC1Q13415 861 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 VEPH1Q14D04 833 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-210ENST00000489961 VSTM1Q6UX27 236 aa11.57□□□□□ -0.56
VPS13D-210ENST00000489961 APTXQ7Z2E3 356 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms