RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 IL9P15248 144 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 ZNF18P17022 549 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 SLC9A1P19634 815 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 CDK11BP21127 795 aaKnown RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 PSMC1P62191 440 aaKnown RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 NFE2Q16621 373 aaPredicted RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 MYCBPAPQ8TBZ2 947 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 C2orf15Q8WU43 125 aaKnown RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 NT5C1BQ96P26 610 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 CRACR2AQ9BSW2 395 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 RHOBTB2Q9BYZ6 727 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 TAB2Q9NYJ8 693 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 HSFX1Q9UBD0 423 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 USP15Q9Y4E8 981 aaPredicted RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 PCDHB5Q9Y5E4 795 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 INSL5Q9Y5Q6 135 aa16.18■□□□□ 0.18
FDPS-213ENST00000489003 SPTBN5Q9NRC6 3674 aaKnown RBP16.18■□□□□ 0.18
FDPS-213ENST00000489003 LRRC10BA6NIK2 292 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 HAPLN1P10915 354 aaPredicted RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 CD58P19256 250 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 HOXA9P31269 272 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 TUFMP49411 452 aaKnown RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 NDST1P52848 882 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 INCA1Q0VD86 236 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 CUL2Q13617 745 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 KRT31Q15323 416 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 SMAD2Q15796 467 aaKnown RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 CYP26C1Q6V0L0 522 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 GBP6Q6ZN66 633 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 UNC93AQ86WB7 457 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 TTC9BQ8N6N2 239 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 SPPL2BQ8TCT7 592 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 SMG7Q92540 1137 aaKnown RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 ARID3AQ99856 593 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 INTS2Q9H0H0 1204 aaKnown RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 VPS16Q9H269 839 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 HMGXB4Q9UGU5 601 aa16.17■□□□□ 0.18
FDPS-213ENST00000489003 LIMA1Q9UHB6 759 aaKnown RBP16.17■□□□□ 0.18
FDPS-213ENST00000489003 NOTCH4Q99466 2003 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 GTPBP10A4D1E9 387 aaKnown RBP16.16■□□□□ 0.18
FDPS-213ENST00000489003 CILPO75339 1184 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 CYP2F1P24903 491 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 PON1P27169 355 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 MTHFRP42898 656 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 KCNMA1Q12791 1236 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 TWF1Q12792 350 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 ORC1Q13415 861 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 MDH1BQ5I0G3 518 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 PHLDB3Q6NSJ2 640 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 ACOT1Q86TX2 421 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 ARHGEF19Q8IW93 802 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 UBR7Q8N806 425 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 B3GNT5Q9BYG0 378 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 PIDD1Q9HB75 910 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 CBX8Q9HC52 389 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 CISHQ9NSE2 258 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
FDPS-213ENST00000489003 CEP72Q9P209 647 aa16.16■□□□□ 0.18
FDPS-213ENST00000489003 DNMT3BQ9UBC3 853 aaKnown RBP16.16■□□□□ 0.18
FDPS-213ENST00000489003 SOAT2O75908 522 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 LRG1P02750 347 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 POU2F2P09086 479 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
FDPS-213ENST00000489003 MAPRE1Q15691 268 aaKnown RBP16.15■□□□□ 0.18
FDPS-213ENST00000489003 EXOC3L4Q17RC7 722 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 MGAT5BQ3V5L5 792 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 C4orf50Q6ZRC1 276 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 PAQR9Q6ZVX9 377 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 SPATA2LQ8IUW3 424 aaPredicted RBP16.15■□□□□ 0.18
FDPS-213ENST00000489003 TTC39CQ8N584 583 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 B3GALNT2Q8NCR0 500 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 KAT5Q92993 513 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 MYLPFQ96A32 169 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 PCED1BQ96HM7 432 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 RIPOR3Q96MK2 946 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 NECTIN4Q96NY8 510 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 FAM50BQ9Y247 325 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 YIPF1Q9Y548 306 aa16.15■□□□□ 0.18
FDPS-213ENST00000489003 PTPRDP23468 1912 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 BECN2A8MW95 431 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 XYLBO75191 536 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 CAVIN2O95810 425 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 ATP1A3P13637 1013 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 PTPN2P17706 415 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
FDPS-213ENST00000489003 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
FDPS-213ENST00000489003 ALDH1A3P47895 512 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 NTHL1P78549 312 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 CYP27A1Q02318 531 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 APBA1Q02410 837 aa16.14■□□□□ 0.17
FDPS-213ENST00000489003 CBX2Q14781 532 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms