RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 GCNT4Q9P109 453 aa20.89■□□□□ 0.93
SEC22A-208ENST00000487572 HMGXB4Q9UGU5 601 aa20.89■□□□□ 0.93
SEC22A-208ENST00000487572 MAFFQ9ULX9 164 aa20.89■□□□□ 0.93
SEC22A-208ENST00000487572 PCDHB5Q9Y5E4 795 aa20.89■□□□□ 0.93
SEC22A-208ENST00000487572 HNRNPA1P09651 372 aaKnown RBP eCLIP20.88■□□□□ 0.93
SEC22A-208ENST00000487572 NDST1P52848 882 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 TWF1Q12792 350 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 SMARCB1Q12824 385 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 NFE2Q16621 373 aaPredicted RBP20.88■□□□□ 0.93
SEC22A-208ENST00000487572 MGAT5BQ3V5L5 792 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 MIIPQ5JXC2 388 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 ATAT1Q5SQI0 421 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 SPATA2LQ8IUW3 424 aaPredicted RBP20.88■□□□□ 0.93
SEC22A-208ENST00000487572 DHX40Q8IX18 779 aaKnown RBP20.88■□□□□ 0.93
SEC22A-208ENST00000487572 LMO3Q8TAP4 145 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 MYLPFQ96A32 169 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 RIPOR3Q96MK2 946 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 NDST4Q9H3R1 872 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 FAM50BQ9Y247 325 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 YIPF1Q9Y548 306 aa20.88■□□□□ 0.93
SEC22A-208ENST00000487572 XIRP2A4UGR9 3374 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 XYLBO75191 536 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 PTPN1P18031 435 aaKnown RBP20.87■□□□□ 0.93
SEC22A-208ENST00000487572 CDK11BP21127 795 aaKnown RBP20.87■□□□□ 0.93
SEC22A-208ENST00000487572 CYP27A1Q02318 531 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 CUL2Q13617 745 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 CBX2Q14781 532 aaPredicted RBP20.87■□□□□ 0.93
SEC22A-208ENST00000487572 KRT31Q15323 416 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 FAM171BQ6P995 826 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 GBP6Q6ZN66 633 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 ACOT1Q86TX2 421 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 PPM1KQ8N3J5 372 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 B3GALNT2Q8NCR0 500 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 SPPL2BQ8TCT7 592 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 C2orf15Q8WU43 125 aaKnown RBP20.87■□□□□ 0.93
SEC22A-208ENST00000487572 SUSD6Q92537 303 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 RHOBTB2Q9BYZ6 727 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 VPS16Q9H269 839 aa20.87■□□□□ 0.93
SEC22A-208ENST00000487572 MTCL1Q9Y4B5 1905 aaKnown RBP20.86■□□□□ 0.93
SEC22A-208ENST00000487572 SPTBN5Q9NRC6 3674 aaKnown RBP20.86■□□□□ 0.93
SEC22A-208ENST00000487572 SMTNL1A8MU46 457 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 BECN2A8MW95 431 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 TPM2P07951 284 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 HOXA9P31269 272 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 MTHFRP42898 656 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 ALDH1A3P47895 512 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 INCA1Q0VD86 236 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 MAPRE1Q15691 268 aaKnown RBP20.86■□□□□ 0.93
SEC22A-208ENST00000487572 SMAD2Q15796 467 aaKnown RBP20.86■□□□□ 0.93
SEC22A-208ENST00000487572 C4orf50Q6ZRC1 276 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 RTL10Q7L3V2 364 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 ARHGEF19Q8IW93 802 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 ANKRD20A12PQ8NF67 263 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 MYCBPAPQ8TBZ2 947 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 TNIP3Q96KP6 325 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 TWNKQ96RR1 684 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 CISHQ9NSE2 258 aa20.86■□□□□ 0.93
SEC22A-208ENST00000487572 CILPO75339 1184 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 HAPLN1P10915 354 aaPredicted RBP20.85■□□□□ 0.93
SEC22A-208ENST00000487572 SLC9A1P19634 815 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 TBXAS1P24557 533 aaPredicted RBP20.85■□□□□ 0.93
SEC22A-208ENST00000487572 CYP2F1P24903 491 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 PLD1Q13393 1074 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 EXOC3L4Q17RC7 722 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 ZNF394Q53GI3 561 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 RRAGAQ7L523 313 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 GRASPQ7Z6J2 395 aaPredicted RBP20.85■□□□□ 0.93
SEC22A-208ENST00000487572 UNC93AQ86WB7 457 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 ELMOD1Q8N336 334 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 FAM200AQ8TCP9 573 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 PCED1BQ96HM7 432 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 FAXDC2Q96IV6 333 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 HSD3B7Q9H2F3 369 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 POMKQ9H5K3 350 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 CBX8Q9HC52 389 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 HCFC1R1Q9NWW0 138 aa20.85■□□□□ 0.93
SEC22A-208ENST00000487572 BMP1P13497 986 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 ATP1A3P13637 1013 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 ZNF18P17022 549 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 SP100P23497 879 aaPredicted RBP20.84■□□□□ 0.93
SEC22A-208ENST00000487572 TUFMP49411 452 aaKnown RBP20.84■□□□□ 0.93
SEC22A-208ENST00000487572 GPR15P49685 360 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 EPHB3P54753 998 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 NTHL1P78549 312 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 APBA1Q02410 837 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 TJAP1Q5JTD0 557 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 TRIM65Q6PJ69 517 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 SCN4BQ8IWT1 228 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 WHAMMQ8TF30 809 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 KAT5Q92993 513 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 NECTIN4Q96NY8 510 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 MED10Q9BTT4 135 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 NT5C1AQ9BXI3 368 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 ELOVL4Q9GZR5 314 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 ABCB6Q9NP58 842 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 HSFX1Q9UBD0 423 aa20.84■□□□□ 0.93
SEC22A-208ENST00000487572 GTPBP10A4D1E9 387 aaKnown RBP20.83■□□□□ 0.93
SEC22A-208ENST00000487572 CLDN5O00501 218 aa20.83■□□□□ 0.93
SEC22A-208ENST00000487572 TRIM21P19474 475 aaKnown RBP20.83■□□□□ 0.93
SEC22A-208ENST00000487572 BDNFP23560 247 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms