RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 SQSTM1Q13501 440 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 CERKLQ49MI3 558 aaPredicted RBP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 GJC2Q5T442 439 aaPredicted RBP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 ZNF618Q5T7W0 954 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 KIRREL2Q6UWL6 708 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 WDR53Q7Z5U6 358 aaPredicted RBP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 GALNT4Q8N4A0 578 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 TGFBRAP1Q8WUH2 860 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 DDX17Q92841 729 aaKnown RBP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 FAM136AQ96C01 138 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 DAZAP1Q96EP5 407 aaKnown RBP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 CYFIP2Q96F07 1278 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 SIGLEC11Q96RL6 698 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 SMOQ99835 787 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 FSD1LQ9BXM9 530 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.01□□□□□ -1.93
COMMD6-211ENST00000486516 ZBTB40Q9NUA8 1239 aa3.01□□□□□ -1.93
COMMD6-211ENST00000486516 IL6RP08887 468 aaPredicted RBP3□□□□□ -1.93
COMMD6-211ENST00000486516 CHRM3P20309 590 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 LPOP22079 712 aaPredicted RBP3□□□□□ -1.93
COMMD6-211ENST00000486516 CTXN1P60606 82 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 SP2Q02086 613 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 MGAT2Q10469 447 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 SART3Q15020 963 aaKnown RBP3□□□□□ -1.93
COMMD6-211ENST00000486516 C21orf62-AS1Q17RA5 79 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 TREML2Q5T2D2 321 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 OTUD3Q5T2D3 398 aaPredicted RBP3□□□□□ -1.93
COMMD6-211ENST00000486516 CAPRIN2Q6IMN6 1127 aaKnown RBP3□□□□□ -1.93
COMMD6-211ENST00000486516 TAF2Q6P1X5 1199 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 ZNF813Q6ZN06 617 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 C11orf74Q86VG3 221 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 CMIPQ8IY22 773 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 ASB5Q8WWX0 329 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 JKAMPQ9P055 326 aa3□□□□□ -1.93
COMMD6-211ENST00000486516 H7C1Q1 480 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 POLRMTO00411 1230 aaKnown RBP2.99□□□□□ -1.93
COMMD6-211ENST00000486516 EXOC3O60645 756 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 POU3F2P20265 443 aaPredicted RBP2.99□□□□□ -1.93
COMMD6-211ENST00000486516 CD6P30203 668 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 MRPS9P82933 396 aaKnown RBP2.99□□□□□ -1.93
COMMD6-211ENST00000486516 SF3B4Q15427 424 aaKnown RBP eCLIP2.99□□□□□ -1.93
COMMD6-211ENST00000486516 CNNM4Q6P4Q7 775 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 ZNF365Q70YC5 407 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.99□□□□□ -1.933e-6■■□□□ 14
COMMD6-211ENST00000486516 FAM109AQ8N4B1 249 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 ARFGAP1Q8N6T3 406 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 MRPL44Q9H9J2 332 aaKnown RBP2.99□□□□□ -1.93
COMMD6-211ENST00000486516 KANSL2Q9H9L4 492 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
COMMD6-211ENST00000486516 TLR2O60603 784 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 SLC43A1O75387 559 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 MTHFD1P11586 935 aaKnown RBP2.98□□□□□ -1.93
COMMD6-211ENST00000486516 RHCEP18577 417 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 MALLQ13021 153 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 ATP2B3Q16720 1220 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 PABPC1LQ4VXU2 614 aaKnown RBP2.98□□□□□ -1.93
COMMD6-211ENST00000486516 KCNK18Q7Z418 384 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 SLC15A3Q8IY34 581 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 LRRC71Q8N4P6 559 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 PSD4Q8NDX1 1056 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 DPF2Q92785 391 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 PACSIN1Q9BY11 444 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 ETAA1Q9NY74 926 aa2.98□□□□□ -1.93
COMMD6-211ENST00000486516 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 TULP3O75386 442 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 RFPL3O75679 317 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 CHRM5P08912 532 aaPredicted RBP2.97□□□□□ -1.93
COMMD6-211ENST00000486516 NPSP0C0P6 89 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 ALDH5A1P51649 535 aaPredicted RBP2.97□□□□□ -1.93
COMMD6-211ENST00000486516 TEDDM1Q5T9Z0 273 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 SERPINA13PQ6UXR4 307 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 LRRTM3Q86VH5 581 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 IL17RDQ8NFM7 739 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 ACAP3Q96P50 834 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 MANSC1Q9H8J5 431 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 PCDHGA2Q9Y5H1 932 aa2.97□□□□□ -1.93
COMMD6-211ENST00000486516 TCRBV5S1A1TA0A578 114 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 ASMTLO95671 621 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 A1BGP04217 495 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 FESP07332 822 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 RENBPP51606 427 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 PDE1AP54750 535 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 TOR2AQ5JU69 321 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 TERB1Q8NA31 727 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.96□□□□□ -1.94
COMMD6-211ENST00000486516 TMX3Q96JJ7 454 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 TMEM204Q9BSN7 226 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 ZBTB21Q9ULJ3 1066 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 DNM3Q9UQ16 869 aa2.96□□□□□ -1.94
COMMD6-211ENST00000486516 ERI2A8K979 691 aaKnown RBP2.95□□□□□ -1.94
COMMD6-211ENST00000486516 SLC16A3O15427 465 aaKnown RBP2.95□□□□□ -1.94
COMMD6-211ENST00000486516 VPS4BO75351 444 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 THBS4P35443 961 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 ID2Q02363 134 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 TARDBPQ13148 414 aaKnown RBP eCLIP2.95□□□□□ -1.94
COMMD6-211ENST00000486516 GTF2H3Q13889 308 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 NFATC4Q14934 902 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 ATP13A4Q4VNC1 1196 aa2.95□□□□□ -1.94
COMMD6-211ENST00000486516 DTX2Q86UW9 622 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms