RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 ALDH1A2O94788 518 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 TSPAN19P0C672 248 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 THRAP10827 490 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SSTP61278 116 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 NEK5Q6P3R8 708 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 MMADHCQ9H3L0 296 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ARPC4-TTLL3A0A0A6YYG9 625 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 IFNGR2P38484 337 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SPIRE1Q08AE8 756 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 RABL6Q3YEC7 729 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 FAM98BQ52LJ0 330 aaKnown RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ENOSF1Q7L5Y1 443 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PALB2Q86YC2 1186 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 AMNQ9BXJ7 453 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 V9GYQ6 96 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 LGALS16A8MUM7 142 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ITGA6P23229 1130 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PTK7Q13308 1070 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 NR1D2Q14995 579 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ATG16L2Q8NAA4 619 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 OSCP1Q8WVF1 389 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ATXN7L3BQ96GX2 97 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 IL1RL2Q9HB29 575 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 EPB41L4AQ9HCS5 686 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 TOPORSQ9NS56 1045 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 DDX18Q9NVP1 670 aaKnown RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 MAN1B1Q9UKM7 699 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 STX16-NPEPL1H3BU86 382 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 STX16O14662 325 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ERFP50548 548 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 POU4F1Q01851 419 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 EPC2Q52LR7 807 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 TTC23Q5W5X9 447 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 LENG1Q96BZ8 264 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 RNPC3Q96LT9 517 aaKnown RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PALD1Q9ULE6 856 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 HBS1LQ9Y450 684 aaKnown RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 C3orf70A6NLC5 250 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 UGT3A1Q6NUS8 523 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 RFFLQ8WZ73 363 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SUCLG2Q96I99 432 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 RPAP1Q9BWH6 1393 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SNAP23O00161 211 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PLOD2O00469 737 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ITIH2P19823 946 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 HK2P52789 917 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 GATAD2AQ86YP4 633 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 G3V2T6 193 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 TSPAN4O14817 238 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 CAMK1Q14012 370 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 POLA2Q14181 598 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 CHSY1Q86X52 802 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 TRPV1Q8NER1 839 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 GPN3Q9UHW5 284 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ADGRA2Q96PE1 1338 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ESYT3A0FGR9 886 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 OR14I1A6ND48 311 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SMNDC1O75940 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 FAPQ12884 760 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 HIST2H2ACQ16777 129 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 HIST2H2AA3Q6FI13 130 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 SCFD2Q8WU76 684 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
ALMS1-204ENST00000484298 NDUFS3O75489 264 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 ITGADQ13349 1161 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 STARD13Q9Y3M8 1113 aa9.91□□□□□ -0.82
ALMS1-204ENST00000484298 CD3EAPO15446 510 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ERN1O75460 977 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 KRT36O76013 467 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 PLCG1P19174 1290 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ARL4DP49703 201 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 PTGISQ16647 500 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 CITED4Q96RK1 184 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 MND1Q9BWT6 205 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ROGDIQ9GZN7 287 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 PCMTD2Q9NV79 361 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 EFR3BQ9Y2G0 817 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 FAM20BO75063 409 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ATP5BP06576 529 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 APRTP07741 180 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 MSL3P1P0C860 447 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 ZNF285Q96NJ3 590 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 SERPIND1P05546 499 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 PECAM1P16284 738 aaPredicted RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 CCND2P30279 289 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 MSTO1Q9BUK6 570 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 RRN3Q9NYV6 651 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 BCLAF3A2AJT9 711 aaKnown RBP9.9□□□□□ -0.82
ALMS1-204ENST00000484298 K7ERI5 159 aa9.9□□□□□ -0.82
ALMS1-204ENST00000484298 FASP25445 335 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms